RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ELP3Q9H9T3 547 aa17.91■□□□□ 0.46
SMARCE1-205ENST00000431889 PTPRCP08575 1304 aa17.9■□□□□ 0.46
SMARCE1-205ENST00000431889 SUPT20HL1Q3ZLR7 823 aa17.9■□□□□ 0.46
SMARCE1-205ENST00000431889 SPDYE2Q495Y8 402 aa17.9■□□□□ 0.46
SMARCE1-205ENST00000431889 PDE8BO95263 885 aa17.89■□□□□ 0.45
SMARCE1-205ENST00000431889 IFNL1Q8IU54 200 aa17.89■□□□□ 0.45
SMARCE1-205ENST00000431889 PPP2R3BQ9Y5P8 575 aa17.89■□□□□ 0.45
SMARCE1-205ENST00000431889 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
SMARCE1-205ENST00000431889 CAVIN4Q5BKX8 364 aa17.88■□□□□ 0.45
SMARCE1-205ENST00000431889 SERPINA10Q9UK55 444 aa17.88■□□□□ 0.45
SMARCE1-205ENST00000431889 NOB1Q9ULX3 412 aaKnown RBP17.88■□□□□ 0.45
SMARCE1-205ENST00000431889 BRCA2P51587 3418 aa17.88■□□□□ 0.45
SMARCE1-205ENST00000431889 MYH13Q9UKX3 1938 aa17.88■□□□□ 0.45
SMARCE1-205ENST00000431889 FKTNO75072 461 aa17.87■□□□□ 0.45
SMARCE1-205ENST00000431889 IREB2P48200 963 aaKnown RBP17.87■□□□□ 0.45
SMARCE1-205ENST00000431889 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
SMARCE1-205ENST00000431889 OPTNQ96CV9 577 aa17.87■□□□□ 0.45
SMARCE1-205ENST00000431889 TEPSINQ96N21 525 aa17.87■□□□□ 0.45
SMARCE1-205ENST00000431889 MKI67P46013 3256 aaKnown RBP17.87■□□□□ 0.45
SMARCE1-205ENST00000431889 PTPN18Q99952 460 aa17.87■□□□□ 0.45
SMARCE1-205ENST00000431889 MANSC4A6NHS7 340 aaPredicted RBP17.86■□□□□ 0.45
SMARCE1-205ENST00000431889 PA2G4Q9UQ80 394 aaKnown RBP17.86■□□□□ 0.45
SMARCE1-205ENST00000431889 ECM2O94769 699 aaPredicted RBP17.85■□□□□ 0.45
SMARCE1-205ENST00000431889 CAP1Q01518 475 aa17.85■□□□□ 0.45
SMARCE1-205ENST00000431889 ANKRD13AQ8IZ07 590 aa17.85■□□□□ 0.45
SMARCE1-205ENST00000431889 EYA2O00167 538 aa17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 ZBTB48P10074 688 aaPredicted RBP17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 FGFR2P21802 821 aa17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 CRHR2Q13324 411 aa17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 VGLL4Q14135 290 aa17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 PUM3Q15397 648 aaKnown RBP17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 ATG9AQ7Z3C6 839 aa17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 TEKT1Q969V4 418 aa17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 TRIM17Q9Y577 477 aa17.84■□□□□ 0.45
SMARCE1-205ENST00000431889 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.45
SMARCE1-205ENST00000431889 TNFAIP1Q13829 316 aa17.83■□□□□ 0.45
SMARCE1-205ENST00000431889 CD99L2Q8TCZ2 262 aa17.83■□□□□ 0.45
SMARCE1-205ENST00000431889 OTUD5Q96G74 571 aa17.83■□□□□ 0.45
SMARCE1-205ENST00000431889 LRRFIP2Q9Y608 721 aaKnown RBP17.83■□□□□ 0.45
SMARCE1-205ENST00000431889 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.44
SMARCE1-205ENST00000431889 ALDH1L2Q3SY69 923 aa17.83■□□□□ 0.44
SMARCE1-205ENST00000431889 ZKSCAN4Q969J2 545 aaPredicted RBP17.83■□□□□ 0.44
SMARCE1-205ENST00000431889 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
SMARCE1-205ENST00000431889 LAMB1P07942 1786 aa17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 SLC5A1P13866 664 aa17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 TNNI2P48788 182 aa17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 DIXDC1Q155Q3 683 aa17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 APOBEC3HQ6NTF7 200 aaKnown RBP17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 MIGA2Q7L4E1 593 aa17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 TRMT2AQ8IZ69 625 aaKnown RBP17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 AK9Q5TCS8 1911 aa17.82■□□□□ 0.44
SMARCE1-205ENST00000431889 TCP10Q12799 353 aa17.81■□□□□ 0.44
SMARCE1-205ENST00000431889 PKN2Q16513 984 aaKnown RBP17.81■□□□□ 0.44
SMARCE1-205ENST00000431889 TBC1D22AQ8WUA7 517 aa17.81■□□□□ 0.44
SMARCE1-205ENST00000431889 MEIS3Q99687 375 aa17.81■□□□□ 0.44
SMARCE1-205ENST00000431889 ZSWIM8A7E2V4 1837 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 ALDH1A1P00352 501 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 ADORA1P30542 326 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 INHBEP58166 350 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 OTOP1Q7RTM1 612 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.8■□□□□ 0.446e-7■■■■□ 23.4
SMARCE1-205ENST00000431889 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 CFHR5Q9BXR6 569 aa17.8■□□□□ 0.44
SMARCE1-205ENST00000431889 CCL15-CCL14A0A0B4J2E2 113 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 PRDX5P30044 214 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 CCL15Q16663 113 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 ATP2B3Q16720 1220 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 LPIN2Q92539 896 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 ZDHHC15Q96MV8 337 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 WRNIP1Q96S55 665 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 PHKA1P46020 1223 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 FAM43AQ8N2R8 423 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 PIAS4Q8N2W9 510 aaPredicted RBP17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 TMOD2Q9NZR1 351 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 CSADQ9Y600 493 aa17.79■□□□□ 0.44
SMARCE1-205ENST00000431889 SNCAIPQ9Y6H5 919 aa17.78■□□□□ 0.44
SMARCE1-205ENST00000431889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
SMARCE1-205ENST00000431889 MYCP01106 439 aaPredicted RBP17.77■□□□□ 0.44
SMARCE1-205ENST00000431889 SLURP2P0DP57 97 aa17.77■□□□□ 0.44
SMARCE1-205ENST00000431889 HDLBPQ00341 1268 aaKnown RBP17.77■□□□□ 0.44
SMARCE1-205ENST00000431889 NFIAQ12857 509 aa17.77■□□□□ 0.44
SMARCE1-205ENST00000431889 NOM1Q5C9Z4 860 aaKnown RBP17.77■□□□□ 0.44
SMARCE1-205ENST00000431889 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
SMARCE1-205ENST00000431889 POTEFA5A3E0 1075 aa17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 INPP5BP32019 993 aa17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 TIMM10P62072 90 aa17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 OTUD7BQ6GQQ9 843 aa17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 CDC42EP5Q6NZY7 148 aa17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 DAGLAQ9Y4D2 1042 aa17.76■□□□□ 0.43
SMARCE1-205ENST00000431889 TESPA1A2RU30 521 aaPredicted RBP17.75■□□□□ 0.43
SMARCE1-205ENST00000431889 SP3Q02447 781 aa17.75■□□□□ 0.43
SMARCE1-205ENST00000431889 TAF1CQ15572 869 aaPredicted RBP17.75■□□□□ 0.43
SMARCE1-205ENST00000431889 WDR66Q8TBY9 1149 aa17.75■□□□□ 0.43
SMARCE1-205ENST00000431889 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms