RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 ME3Q16798 604 aa13.36□□□□□ -0.27
SMPD4-205ENST00000431183 LIMCH1Q9UPQ0 1083 aa13.36□□□□□ -0.27
SMPD4-205ENST00000431183 H0YIN7 160 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 NECTIN1Q15223 517 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
SMPD4-205ENST00000431183 MFSD14BQ5SR56 506 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 MAPKAPK5Q8IW41 473 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-205ENST00000431183 TAF1P21675 1872 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 MAGEB6P1A0A0J9YX57 407 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 H3BQV1 296 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
SMPD4-205ENST00000431183 TCP10Q12799 353 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-205ENST00000431183 IFFO2Q5TF58 517 aa13.35□□□□□ -0.27
SMPD4-205ENST00000431183 E7EWF7 191 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 PPEF1O14829 653 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-205ENST00000431183 GJB2P29033 226 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 ZSCAN25Q6NSZ9 544 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 SIPA1L3O60292 1781 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-205ENST00000431183 ADD2P35612 726 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 MPNDQ8N594 471 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
SMPD4-205ENST00000431183 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 MCM9Q9NXL9 1143 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 TFIP11Q9UBB9 837 aaKnown RBP13.34□□□□□ -0.27
SMPD4-205ENST00000431183 LDHBP07195 334 aaKnown RBP13.34□□□□□ -0.27
SMPD4-205ENST00000431183 CYP2D6P10635 497 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 FAM47AQ5JRC9 791 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 GPR108Q9NPR9 543 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 DDX49Q9Y6V7 483 aaKnown RBP13.34□□□□□ -0.27
SMPD4-205ENST00000431183 RIC1Q4ADV7 1423 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 SHANK3Q9BYB0 1731 aa13.34□□□□□ -0.27
SMPD4-205ENST00000431183 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.27
SMPD4-205ENST00000431183 LARP1BQ659C4 914 aaKnown RBP13.33□□□□□ -0.27
SMPD4-205ENST00000431183 POLLQ9UGP5 575 aa13.33□□□□□ -0.27
SMPD4-205ENST00000431183 PRC1O43663 620 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
SMPD4-205ENST00000431183 MECOMQ03112 1051 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 TGFBRAP1Q8WUH2 860 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 PNPLA7Q6ZV29 1317 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 KLF18A0A0U1RQI7 1052 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 USP17L21D6R901 530 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 GOLGA6L22H0YM25 854 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 NACAP1Q9BZK3 213 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 BCS1LQ9Y276 419 aa13.33□□□□□ -0.28
SMPD4-205ENST00000431183 GOLGA8BA8MQT2 603 aa13.32□□□□□ -0.28
SMPD4-205ENST00000431183 IFIT3O14879 490 aaKnown RBP13.32□□□□□ -0.28
SMPD4-205ENST00000431183 UBE4AQ14139 1066 aa13.32□□□□□ -0.28
SMPD4-205ENST00000431183 RAD17O75943 681 aa13.32□□□□□ -0.28
SMPD4-205ENST00000431183 PANK2Q9BZ23 570 aa13.32□□□□□ -0.28
SMPD4-205ENST00000431183 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
SMPD4-205ENST00000431183 POLR3DP05423 398 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-205ENST00000431183 ZNF804AQ7Z570 1209 aa13.32□□□□□ -0.28
SMPD4-205ENST00000431183 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-205ENST00000431183 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
SMPD4-205ENST00000431183 FGFR2P21802 821 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 TM4SF1P30408 202 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 GNL2Q13823 731 aaKnown RBP13.31□□□□□ -0.28
SMPD4-205ENST00000431183 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 SNX21Q969T3 373 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 SENP2Q9HC62 589 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-205ENST00000431183 GOLGA6L3A6NEY3 463 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 IFNL3Q8IZI9 196 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 DYNLL2Q96FJ2 89 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 FAM196BA6NMK8 535 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 MCM4P33991 863 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 AOC3Q16853 763 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 TBC1D10CQ8IV04 446 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 SLC44A5Q8NCS7 719 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
SMPD4-205ENST00000431183 XDHP47989 1333 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 ZFYP08048 801 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-205ENST00000431183 ADRA2BP18089 450 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 TMEM67Q5HYA8 995 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 MFSD6Q6ZSS7 791 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 PHKBQ93100 1093 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 ZNF277Q9NRM2 450 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-205ENST00000431183 PCDHAC2Q9Y5I4 1007 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
SMPD4-205ENST00000431183 NMT2O60551 498 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 TBC1D16Q8TBP0 767 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 STX8Q9UNK0 236 aa13.3□□□□□ -0.28
SMPD4-205ENST00000431183 BAZ2BQ9UIF8 2168 aaKnown RBP13.29□□□□□ -0.28
SMPD4-205ENST00000431183 STRBPQ96SI9 672 aaKnown RBP13.29□□□□□ -0.28
SMPD4-205ENST00000431183 RBM27Q9P2N5 1060 aaKnown RBP13.29□□□□□ -0.28
SMPD4-205ENST00000431183 TTF2Q9UNY4 1162 aaKnown RBP13.29□□□□□ -0.28
SMPD4-205ENST00000431183 TRAK2O60296 914 aa13.29□□□□□ -0.28
SMPD4-205ENST00000431183 ANAPC15P60006 121 aa13.29□□□□□ -0.28
SMPD4-205ENST00000431183 UBAC1Q9BSL1 405 aa13.29□□□□□ -0.28
SMPD4-205ENST00000431183 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
SMPD4-205ENST00000431183 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
SMPD4-205ENST00000431183 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
SMPD4-205ENST00000431183 PLSCR1O15162 318 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms