RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 OSBPL3Q9H4L5 887 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 ANKZF1Q9H8Y5 726 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 LMCD1Q9NZU5 365 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 PALD1Q9ULE6 856 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 CDHR2Q9BYE9 1310 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 AKAP12Q02952 1782 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 PTCH1Q13635 1447 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 TUBB2AQ13885 445 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 NOL8Q76FK4 1167 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 SRGAP1Q7Z6B7 1085 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 MFN1Q8IWA4 741 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 ARHGEF1Q92888 912 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 RSRC1Q96IZ7 334 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 ESYT1Q9BSJ8 1104 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 PAGR1Q9BTK6 254 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 TUBB2BQ9BVA1 445 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 ABCB6Q9NP58 842 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 KIF24Q5T7B8 1368 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 SNCBQ16143 134 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 TMEM132AQ24JP5 1023 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 EZH1Q92800 747 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 SMARCC1Q92922 1105 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 PLEKHG4BQ96PX9 1271 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 OSBPL9Q96SU4 736 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 C3P01024 1663 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 WASLO00401 505 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 PHACTR2O75167 634 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 SYF2O95926 243 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 CDR1P51861 262 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 NAP1L1P55209 391 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 CHMP4BP1P59074 171 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 KCNB1Q14721 858 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 MICALCLQ6ZW33 695 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 SPATA21Q7Z572 469 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 TMTC2Q8N394 836 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 BCAS4Q8TDM0 211 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 EDC4Q6P2E9 1401 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-206ENST00000429440 ZSCAN9O15535 394 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 GBP2P32456 591 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 DRP2Q13474 957 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 ZRSR2Q15696 482 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 CCDC40Q4G0X9 1142 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 DHX40Q8IX18 779 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 MAF1Q9H063 256 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 C1orf115Q9H7X2 142 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 VCPKMTQ9H867 229 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 LIMCH1Q9UPQ0 1083 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 ADAMTS13Q76LX8 1427 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 EIF3HO15372 352 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 PYGLP06737 847 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 PPFIA1Q13136 1202 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 SDCCAG8Q86SQ7 713 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 RGL1Q9NZL6 768 aa10.11□□□□□ -0.79
CDC42BPA-206ENST00000429440 VWA3AA6NCI4 1184 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 SKAP2O75563 359 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 ECEL1O95672 775 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 PEX19P40855 299 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 LAMB3Q13751 1172 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 DCTN1Q14203 1278 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 SLMAPQ14BN4 828 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 MYSM1Q5VVJ2 828 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 TXNDC2Q86VQ3 553 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 IGSF22Q8N9C0 903 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 UPF3BQ9BZI7 483 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 ANO10Q9NW15 660 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 GGA2Q9UJY4 613 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 PRR36Q9H6K5 1346 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 ERICH2A1L162 156 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 CUTAO60888 179 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 ACTN3Q08043 901 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 CAPRIN2Q6IMN6 1127 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 C11orf57Q6ZUT1 292 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 CEP57Q86XR8 500 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 FAM76AQ8TAV0 307 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 SLX1AQ9BQ83 275 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 KAT14Q9H8E8 782 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 ADGRL3Q9HAR2 1447 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 ABCC4O15439 1325 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 NRKQ7Z2Y5 1582 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 TNRQ92752 1358 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 TMEM2Q9UHN6 1383 aa10.1□□□□□ -0.79
CDC42BPA-206ENST00000429440 GNG11P61952 73 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 CWF19L1Q69YN2 538 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 SLC30A9Q6PML9 568 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 NME9Q86XW9 330 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 TTC14Q96N46 770 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 ZNF396Q96N95 335 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 PNKPQ96T60 521 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms