RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 PLCB3Q01970 1234 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 CCDC117Q8IWD4 279 aaPredicted RBP14.4□□□□□ -0.1
LDB3-205ENST00000429277 SNX16P57768 344 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.4□□□□□ -0.1
LDB3-205ENST00000429277 CFAP57Q96MR6 1250 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 DDX23Q9BUQ8 820 aaKnown RBP14.4□□□□□ -0.1
LDB3-205ENST00000429277 VEZTQ9HBM0 779 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 NSFL1CQ9UNZ2 370 aaKnown RBP14.4□□□□□ -0.1
LDB3-205ENST00000429277 ABCC1P33527 1531 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 CLCN1P35523 988 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 MYL5Q02045 173 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 TICAM2Q86XR7 235 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 VTI1AQ96AJ9 217 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 TCEANC2Q96MN5 208 aa14.4□□□□□ -0.1
LDB3-205ENST00000429277 DEXIO95424 95 aa14.4□□□□□ -0.11
LDB3-205ENST00000429277 ATP5DP30049 168 aa14.4□□□□□ -0.11
LDB3-205ENST00000429277 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.11
LDB3-205ENST00000429277 OTUD6BQ8N6M0 293 aa14.4□□□□□ -0.11
LDB3-205ENST00000429277 LRRC59Q96AG4 307 aaKnown RBP14.4□□□□□ -0.11
LDB3-205ENST00000429277 RAPGEF6Q8TEU7 1601 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 EPB41P11171 864 aaKnown RBP14.39□□□□□ -0.11
LDB3-205ENST00000429277 LMOD1P29536 600 aaPredicted RBP14.39□□□□□ -0.11
LDB3-205ENST00000429277 CCDC50Q8IVM0 306 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 ANAPC4Q9UJX5 808 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 SEL1L2Q5TEA6 688 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 IP6K1Q92551 441 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 GAS8O95995 478 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 PTGS1P23219 599 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 ZBTB16Q05516 673 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 RGS22Q8NE09 1264 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 ACSBG1Q96GR2 724 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 RNMTO43148 476 aaKnown RBP14.39□□□□□ -0.11
LDB3-205ENST00000429277 CHMLP26374 656 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 ARID4AP29374 1257 aaPredicted RBP14.39□□□□□ -0.11
LDB3-205ENST00000429277 SLC8A3P57103 927 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.39□□□□□ -0.11
LDB3-205ENST00000429277 NFATC2IPQ8NCF5 419 aa14.39□□□□□ -0.11
LDB3-205ENST00000429277 GABPB2Q8TAK5 448 aaPredicted RBP14.39□□□□□ -0.11
LDB3-205ENST00000429277 UBAP1LF5GYI3 381 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 MCM7P33993 719 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 SMTNP53814 917 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 APOBRQ0VD83 1088 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 TFCP2Q12800 502 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 WDR44Q5JSH3 913 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 CCDC26Q8TAB7 109 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 CCDC110Q8TBZ0 833 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 ATRIPQ8WXE1 791 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 EXOC7Q9UPT5 735 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 PPFIA3O75145 1194 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 MAP7D1Q3KQU3 841 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 FAM169AQ9Y6X4 670 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 FAM160A1Q05DH4 1040 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 PLBD2Q8NHP8 589 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 TIGD1Q96MW7 591 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 PA2G4Q9UQ80 394 aaKnown RBP14.38□□□□□ -0.11
LDB3-205ENST00000429277 ARL1P40616 181 aaPredicted RBP14.38□□□□□ -0.11
LDB3-205ENST00000429277 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
LDB3-205ENST00000429277 CROCCP2Q86T23 111 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 GPR161Q8N6U8 529 aaKnown RBP14.38□□□□□ -0.11
LDB3-205ENST00000429277 ZBTB40Q9NUA8 1239 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
LDB3-205ENST00000429277 BACH1O14867 736 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 MSL1Q68DK7 614 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 CCDC63Q8NA47 563 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 PSMD1Q99460 953 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 ARHGEF10LQ9HCE6 1279 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 YTHDC2Q9H6S0 1430 aaKnown RBP14.37□□□□□ -0.11
LDB3-205ENST00000429277 EYA2O00167 538 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 PLS1Q14651 629 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 CLUL1Q15846 466 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 PUM3Q15397 648 aaKnown RBP14.37□□□□□ -0.11
LDB3-205ENST00000429277 PAIP2Q9BPZ3 127 aaKnown RBP14.37□□□□□ -0.11
LDB3-205ENST00000429277 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 KCNG1Q9UIX4 513 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 STX10O60499 249 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 GCP02774 474 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 MCM6Q14566 821 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 CCDC121Q6ZUS5 278 aa14.37□□□□□ -0.11
LDB3-205ENST00000429277 A6NNZ2 444 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 TUBB8Q3ZCM7 444 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 FNBP1Q96RU3 617 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 LZTS2Q9BRK4 669 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 AKR1B15C9JRZ8 316 aaPredicted RBP14.36□□□□□ -0.11
LDB3-205ENST00000429277 PPP1R7Q15435 360 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 CFAP58Q5T655 872 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 SETDB1Q15047 1291 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 TRAPPC3LQ5T215 181 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
LDB3-205ENST00000429277 EBAG9O00559 213 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 MNAT1P51948 309 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 ARID5AQ03989 594 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 TAF12Q16514 161 aa14.36□□□□□ -0.11
LDB3-205ENST00000429277 INF2Q27J81 1249 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms