RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 PHKA1P46020 1223 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 ATP8B2P98198 1209 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 G3BP1Q13283 466 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRIM39-208ENST00000428555 RASA3Q14644 834 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 ITPRIPQ8IWB1 547 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 WDR66Q8TBY9 1149 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 PANK1Q8TE04 598 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
TRIM39-208ENST00000428555 GNL3LQ9NVN8 582 aaKnown RBP11.75□□□□□ -0.53
TRIM39-208ENST00000428555 SLC10A3P09131 477 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
TRIM39-208ENST00000428555 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 NBPF12Q5TAG4 269 aaPredicted RBP11.74□□□□□ -0.53
TRIM39-208ENST00000428555 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 XAGE2Q96GT9 111 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 NEUROD6Q96NK8 337 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 CSRNP1Q96S65 589 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
TRIM39-208ENST00000428555 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
TRIM39-208ENST00000428555 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 TCP10L2B9ZVM9 353 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 PSME4Q14997 1843 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 SUPT20HL1Q3ZLR7 823 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 LDLRAD1Q5T700 205 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
TRIM39-208ENST00000428555 ARMC9Q7Z3E5 817 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 RASAL3Q86YV0 1011 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
TRIM39-208ENST00000428555 SUGT1Q9Y2Z0 365 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 PPP2R3BQ9Y5P8 575 aa11.73□□□□□ -0.53
TRIM39-208ENST00000428555 PPP1R12BO60237 982 aaPredicted RBP11.72□□□□□ -0.53
TRIM39-208ENST00000428555 CACNB3P54284 484 aa11.72□□□□□ -0.53
TRIM39-208ENST00000428555 MKRN3Q13064 507 aaKnown RBP11.72□□□□□ -0.53
TRIM39-208ENST00000428555 POLA2Q14181 598 aa11.72□□□□□ -0.53
TRIM39-208ENST00000428555 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
TRIM39-208ENST00000428555 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
TRIM39-208ENST00000428555 SLC10A4Q96EP9 437 aa11.72□□□□□ -0.53
TRIM39-208ENST00000428555 ZDHHC15Q96MV8 337 aa11.72□□□□□ -0.53
TRIM39-208ENST00000428555 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
TRIM39-208ENST00000428555 SEMA3EO15041 775 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 CA12O43570 354 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 USP2O75604 605 aaPredicted RBP11.71□□□□□ -0.53
TRIM39-208ENST00000428555 SURF6O75683 361 aaKnown RBP11.71□□□□□ -0.53
TRIM39-208ENST00000428555 TRPA1O75762 1119 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
TRIM39-208ENST00000428555 PRDX5P30044 214 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 TNFAIP1Q13829 316 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 TEPSINQ96N21 525 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 TMEM39BQ9GZU3 492 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 RNF186Q9NXI6 227 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.53
TRIM39-208ENST00000428555 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.54
TRIM39-208ENST00000428555 TNNI2P48788 182 aa11.7□□□□□ -0.54
TRIM39-208ENST00000428555 RASGRF1Q13972 1273 aa11.7□□□□□ -0.54
TRIM39-208ENST00000428555 MVPQ14764 893 aaKnown RBP11.7□□□□□ -0.54
TRIM39-208ENST00000428555 GORABQ5T7V8 394 aa11.7□□□□□ -0.54
TRIM39-208ENST00000428555 CLMNQ96JQ2 1002 aa11.7□□□□□ -0.54
TRIM39-208ENST00000428555 A0A1B0GUL6 1792 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 MAST3O60307 1309 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 CAPN15O75808 1086 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 MS4A1P11836 297 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 OS9Q13438 667 aaPredicted RBP11.69□□□□□ -0.54
TRIM39-208ENST00000428555 MAP3K11Q16584 847 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 CDC42EP5Q6NZY7 148 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
TRIM39-208ENST00000428555 ABCF2Q9UG63 623 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 NOP58Q9Y2X3 529 aaKnown RBP11.69□□□□□ -0.54
TRIM39-208ENST00000428555 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
TRIM39-208ENST00000428555 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
TRIM39-208ENST00000428555 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 ZBTB22O15209 634 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 IREB2P48200 963 aaKnown RBP11.68□□□□□ -0.54
TRIM39-208ENST00000428555 TM4SF4P48230 202 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 SPRYD7Q5W111 196 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 GPR108Q9NPR9 543 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 TMOD2Q9NZR1 351 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 HMG20BQ9P0W2 317 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 COG6Q9Y2V7 657 aa11.68□□□□□ -0.54
TRIM39-208ENST00000428555 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
TRIM39-208ENST00000428555 PI16Q6UXB8 463 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 TBC1D9Q6ZT07 1266 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 ZGPATQ8N5A5 531 aaKnown RBP11.67□□□□□ -0.54
TRIM39-208ENST00000428555 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 DBNDD2Q9BQY9 259 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
TRIM39-208ENST00000428555 UNCXA6NJT0 531 aa11.66□□□□□ -0.54
TRIM39-208ENST00000428555 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
TRIM39-208ENST00000428555 TCP10Q12799 353 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms