RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 HMG20BQ9P0W2 317 aa28.68■■■□□ 2.18
GLI3-202ENST00000428534 SCARF1Q14162 830 aa28.67■■■□□ 2.18
GLI3-202ENST00000428534 SLF2Q8IX21 1173 aa28.67■■■□□ 2.18
GLI3-202ENST00000428534 TNS4Q8IZW8 715 aa28.67■■■□□ 2.18
GLI3-202ENST00000428534 CNTNAP1P78357 1384 aa28.66■■■□□ 2.18
GLI3-202ENST00000428534 ITGBL1O95965 494 aaPredicted RBP28.66■■■□□ 2.18
GLI3-202ENST00000428534 RBM5P52756 815 aaKnown RBP eCLIP28.66■■■□□ 2.18
GLI3-202ENST00000428534 CDC37L1Q7L3B6 337 aa28.66■■■□□ 2.18
GLI3-202ENST00000428534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.66■■■□□ 2.18
GLI3-202ENST00000428534 MYH13Q9UKX3 1938 aa28.66■■■□□ 2.18
GLI3-202ENST00000428534 PITPNM2Q9BZ72 1349 aa28.66■■■□□ 2.18
GLI3-202ENST00000428534 WNT10BO00744 389 aa28.65■■■□□ 2.18
GLI3-202ENST00000428534 MCAMP43121 646 aa28.65■■■□□ 2.18
GLI3-202ENST00000428534 IRX6P78412 446 aaPredicted RBP28.65■■■□□ 2.18
GLI3-202ENST00000428534 CFAP100Q494V2 611 aa28.65■■■□□ 2.18
GLI3-202ENST00000428534 TEKT1Q969V4 418 aa28.65■■■□□ 2.18
GLI3-202ENST00000428534 GPATCH3Q96I76 525 aa28.65■■■□□ 2.18
GLI3-202ENST00000428534 EGFRP00533 1210 aa28.64■■■□□ 2.18
GLI3-202ENST00000428534 MAP1SQ66K74 1059 aaPredicted RBP28.64■■■□□ 2.18
GLI3-202ENST00000428534 HHIPL2Q6UWX4 724 aa28.64■■■□□ 2.18
GLI3-202ENST00000428534 ERICH6Q7L0X2 663 aa28.64■■■□□ 2.18
GLI3-202ENST00000428534 TLR7Q9NYK1 1049 aaKnown RBP28.64■■■□□ 2.18
GLI3-202ENST00000428534 ABCF2Q9UG63 623 aa28.64■■■□□ 2.18
GLI3-202ENST00000428534 CAPN15O75808 1086 aa28.63■■■□□ 2.17
GLI3-202ENST00000428534 CRKP46108 304 aa28.63■■■□□ 2.17
GLI3-202ENST00000428534 ZBED3Q96IU2 234 aaPredicted RBP28.63■■■□□ 2.17
GLI3-202ENST00000428534 COL1A1P02452 1464 aaPredicted RBP28.63■■■□□ 2.17
GLI3-202ENST00000428534 SULF1Q8IWU6 871 aa28.62■■■□□ 2.17
GLI3-202ENST00000428534 SPDYE2BA6NHP3 402 aa28.61■■■□□ 2.17
GLI3-202ENST00000428534 SPDYE6P0CI01 402 aa28.61■■■□□ 2.17
GLI3-202ENST00000428534 GSTO1P78417 241 aa28.61■■■□□ 2.17
GLI3-202ENST00000428534 NBPF9Q3BBW0 867 aa28.61■■■□□ 2.17
GLI3-202ENST00000428534 DZIP1Q86YF9 867 aaKnown RBP28.61■■■□□ 2.17
GLI3-202ENST00000428534 APOBEC3FQ8IUX4 373 aaKnown RBP28.61■■■□□ 2.17
GLI3-202ENST00000428534 BCL11AQ9H165 835 aa28.61■■■□□ 2.17
GLI3-202ENST00000428534 GGA3Q9NZ52 723 aa28.61■■■□□ 2.17
GLI3-202ENST00000428534 TMEM88BA6NKF7 163 aa28.6■■■□□ 2.17
GLI3-202ENST00000428534 NEFLP07196 543 aa28.6■■■□□ 2.17
GLI3-202ENST00000428534 TTF1Q15361 905 aaPredicted RBP28.6■■■□□ 2.17
GLI3-202ENST00000428534 ANKRD45Q5TZF3 282 aa28.6■■■□□ 2.17
GLI3-202ENST00000428534 ANGEL2Q5VTE6 544 aaKnown RBP28.6■■■□□ 2.17
GLI3-202ENST00000428534 TMED8Q6PL24 325 aaPredicted RBP28.6■■■□□ 2.17
GLI3-202ENST00000428534 KRT26Q7Z3Y9 468 aa28.6■■■□□ 2.17
GLI3-202ENST00000428534 ZDHHC15Q96MV8 337 aa28.6■■■□□ 2.17
GLI3-202ENST00000428534 LRP2BPQ9P2M1 347 aa28.6■■■□□ 2.17
GLI3-202ENST00000428534 SMARCA5O60264 1052 aaPredicted RBP28.59■■■□□ 2.17
GLI3-202ENST00000428534 LDHCP07864 332 aa28.59■■■□□ 2.17
GLI3-202ENST00000428534 PRDX5P30044 214 aa28.59■■■□□ 2.17
GLI3-202ENST00000428534 SMC5Q8IY18 1101 aa28.59■■■□□ 2.17
GLI3-202ENST00000428534 ATP5JP18859 108 aa28.58■■■□□ 2.17
GLI3-202ENST00000428534 GRIK5Q16478 980 aa28.58■■■□□ 2.17
GLI3-202ENST00000428534 TNFAIP1Q13829 316 aa28.57■■■□□ 2.16
GLI3-202ENST00000428534 PRMT6Q96LA8 375 aaPredicted RBP28.57■■■□□ 2.16
GLI3-202ENST00000428534 SNRKQ9NRH2 765 aa28.57■■■□□ 2.16
GLI3-202ENST00000428534 ECHDC1Q9NTX5 307 aa28.57■■■□□ 2.16
GLI3-202ENST00000428534 RAI14Q9P0K7 980 aa28.57■■■□□ 2.16
GLI3-202ENST00000428534 ZAP70P43403 619 aa28.56■■■□□ 2.16
GLI3-202ENST00000428534 VEGFBP49765 207 aa28.56■■■□□ 2.16
GLI3-202ENST00000428534 PI16Q6UXB8 463 aa28.56■■■□□ 2.16
GLI3-202ENST00000428534 FAM163AQ96GL9 167 aaPredicted RBP28.56■■■□□ 2.16
GLI3-202ENST00000428534 CYP2E1P05181 493 aaPredicted RBP28.55■■■□□ 2.16
GLI3-202ENST00000428534 USP48Q86UV5 1035 aa28.55■■■□□ 2.16
GLI3-202ENST00000428534 TMOD2Q9NZR1 351 aa28.55■■■□□ 2.16
GLI3-202ENST00000428534 TTC41PQ6P2S7 1318 aa28.54■■■□□ 2.16
GLI3-202ENST00000428534 ERC2O15083 957 aa28.54■■■□□ 2.16
GLI3-202ENST00000428534 FOXN1O15353 648 aa28.54■■■□□ 2.16
GLI3-202ENST00000428534 GLIS2Q9BZE0 524 aaPredicted RBP28.54■■■□□ 2.16
GLI3-202ENST00000428534 PPP2R3BQ9Y5P8 575 aa28.54■■■□□ 2.16
GLI3-202ENST00000428534 IGHDP01880 384 aa28.53■■■□□ 2.16
GLI3-202ENST00000428534 TNNI2P48788 182 aa28.53■■■□□ 2.16
GLI3-202ENST00000428534 MAP3K12Q12852 859 aa28.53■■■□□ 2.16
GLI3-202ENST00000428534 SPDYE2Q495Y8 402 aa28.53■■■□□ 2.16
GLI3-202ENST00000428534 TBC1D9Q6ZT07 1266 aa28.53■■■□□ 2.16
GLI3-202ENST00000428534 TRPM7Q96QT4 1865 aa28.53■■■□□ 2.16
GLI3-202ENST00000428534 MAP4K4O95819 1239 aaPredicted RBP28.52■■■□□ 2.16
GLI3-202ENST00000428534 MECOMQ03112 1051 aa28.52■■■□□ 2.16
GLI3-202ENST00000428534 NSUN4Q96CB9 384 aaKnown RBP28.52■■■□□ 2.16
GLI3-202ENST00000428534 ZNF70Q9UC06 446 aaPredicted RBP28.52■■■□□ 2.16
GLI3-202ENST00000428534 ASTN2O75129 1339 aaPredicted RBP28.51■■■□□ 2.15
GLI3-202ENST00000428534 FKBP1CQ5VVH2 108 aa28.51■■■□□ 2.15
GLI3-202ENST00000428534 APOBEC3HQ6NTF7 200 aaKnown RBP28.51■■■□□ 2.15
GLI3-202ENST00000428534 HAUS7Q99871 368 aa28.51■■■□□ 2.15
GLI3-202ENST00000428534 NOL10Q9BSC4 688 aaKnown RBP28.51■■■□□ 2.15
GLI3-202ENST00000428534 TDRD3Q9H7E2 651 aaKnown RBP28.51■■■□□ 2.15
GLI3-202ENST00000428534 DAGLAQ9Y4D2 1042 aa28.51■■■□□ 2.15
GLI3-202ENST00000428534 GAKO14976 1311 aa28.5■■■□□ 2.15
GLI3-202ENST00000428534 DIXDC1Q155Q3 683 aa28.5■■■□□ 2.15
GLI3-202ENST00000428534 NAA16Q6N069 864 aaPredicted RBP28.5■■■□□ 2.15
GLI3-202ENST00000428534 BOLA2Q9H3K6 86 aa28.5■■■□□ 2.15
GLI3-202ENST00000428534 VEZTQ9HBM0 779 aa28.5■■■□□ 2.15
GLI3-202ENST00000428534 MROH7-TTC4A0A0A0MT08 1334 aa28.49■■■□□ 2.15
GLI3-202ENST00000428534 RASSF10A6NK89 507 aa28.49■■■□□ 2.15
GLI3-202ENST00000428534 NF2P35240 595 aa28.49■■■□□ 2.15
GLI3-202ENST00000428534 FMR1Q06787 632 aaKnown RBP eCLIP28.49■■■□□ 2.15
GLI3-202ENST00000428534 CERS3Q8IU89 383 aa28.49■■■□□ 2.15
GLI3-202ENST00000428534 DNAJC2Q99543 621 aaKnown RBP28.49■■■□□ 2.15
GLI3-202ENST00000428534 PAG1Q9NWQ8 432 aa28.49■■■□□ 2.15
GLI3-202ENST00000428534 PCDHAC2Q9Y5I4 1007 aa28.49■■■□□ 2.15
GLI3-202ENST00000428534 AKAP11Q9UKA4 1901 aa28.49■■■□□ 2.15
GLI3-202ENST00000428534 CLRN2A0PK11 232 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms