RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TMEM39BQ9GZU3 492 aa20.89■□□□□ 0.93
VARS-216ENST00000428445 HTTP42858 3142 aa20.89■□□□□ 0.93
VARS-216ENST00000428445 CACNB3P54284 484 aa20.88■□□□□ 0.93
VARS-216ENST00000428445 FBXO33Q7Z6M2 555 aa20.88■□□□□ 0.93
VARS-216ENST00000428445 ANKRD13AQ8IZ07 590 aa20.88■□□□□ 0.93
VARS-216ENST00000428445 MRPL50Q8N5N7 158 aaKnown RBP20.88■□□□□ 0.93
VARS-216ENST00000428445 ANKRD44Q8N8A2 993 aa20.88■□□□□ 0.93
VARS-216ENST00000428445 CD99L2Q8TCZ2 262 aa20.88■□□□□ 0.93
VARS-216ENST00000428445 OPTNQ96CV9 577 aa20.88■□□□□ 0.93
VARS-216ENST00000428445 SERPINA10Q9UK55 444 aa20.88■□□□□ 0.93
VARS-216ENST00000428445 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.87■□□□□ 0.93
VARS-216ENST00000428445 UTYO14607 1347 aa20.86■□□□□ 0.93
VARS-216ENST00000428445 POTEFA5A3E0 1075 aa20.86■□□□□ 0.93
VARS-216ENST00000428445 BCAMP50895 628 aa20.86■□□□□ 0.93
VARS-216ENST00000428445 METTL24Q5JXM2 366 aa20.86■□□□□ 0.93
VARS-216ENST00000428445 LAMB1P07942 1786 aa20.86■□□□□ 0.93
VARS-216ENST00000428445 MROH5Q6ZUA9 1318 aa20.85■□□□□ 0.93
VARS-216ENST00000428445 RABL6Q3YEC7 729 aaPredicted RBP20.85■□□□□ 0.93
VARS-216ENST00000428445 VPS37DQ86XT2 251 aa20.85■□□□□ 0.93
VARS-216ENST00000428445 MS4A4AQ96JQ5 239 aa20.85■□□□□ 0.93
VARS-216ENST00000428445 MKI67P46013 3256 aaKnown RBP20.84■□□□□ 0.93
VARS-216ENST00000428445 ZNF521Q96K83 1311 aa20.84■□□□□ 0.93
VARS-216ENST00000428445 TESPA1A2RU30 521 aaPredicted RBP20.84■□□□□ 0.93
VARS-216ENST00000428445 FRAT2O75474 233 aaPredicted RBP20.84■□□□□ 0.93
VARS-216ENST00000428445 TNFAIP1Q13829 316 aa20.84■□□□□ 0.93
VARS-216ENST00000428445 PRPF38BQ5VTL8 546 aaKnown RBP20.84■□□□□ 0.93
VARS-216ENST00000428445 VGLL2Q8N8G2 317 aa20.84■□□□□ 0.93
VARS-216ENST00000428445 ARAP2Q8WZ64 1704 aa20.84■□□□□ 0.93
VARS-216ENST00000428445 UNCXA6NJT0 531 aa20.83■□□□□ 0.93
VARS-216ENST00000428445 VGLL4Q14135 290 aa20.83■□□□□ 0.93
VARS-216ENST00000428445 BRI3BPQ8WY22 251 aa20.83■□□□□ 0.93
VARS-216ENST00000428445 PTPN22Q9Y2R2 807 aa20.83■□□□□ 0.93
VARS-216ENST00000428445 PDE8BO95263 885 aa20.82■□□□□ 0.92
VARS-216ENST00000428445 MAP3K9P80192 1104 aa20.82■□□□□ 0.92
VARS-216ENST00000428445 OTUD7BQ6GQQ9 843 aa20.82■□□□□ 0.92
VARS-216ENST00000428445 SSH1Q8WYL5 1049 aa20.82■□□□□ 0.92
VARS-216ENST00000428445 USP44Q9H0E7 712 aa20.82■□□□□ 0.92
VARS-216ENST00000428445 SP3Q02447 781 aa20.81■□□□□ 0.92
VARS-216ENST00000428445 CAVIN4Q5BKX8 364 aa20.81■□□□□ 0.92
VARS-216ENST00000428445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.81■□□□□ 0.92
VARS-216ENST00000428445 OTUD5Q96G74 571 aa20.81■□□□□ 0.92
VARS-216ENST00000428445 ERO1AQ96HE7 468 aa20.81■□□□□ 0.92
VARS-216ENST00000428445 BRCA2P51587 3418 aa20.8■□□□□ 0.92
VARS-216ENST00000428445 CCL15-CCL14A0A0B4J2E2 113 aa20.8■□□□□ 0.92
VARS-216ENST00000428445 TNNI2P48788 182 aa20.8■□□□□ 0.92
VARS-216ENST00000428445 CCL15Q16663 113 aa20.8■□□□□ 0.92
VARS-216ENST00000428445 FAM43AQ8N2R8 423 aa20.8■□□□□ 0.92
VARS-216ENST00000428445 EFCC1Q9HA90 598 aa20.8■□□□□ 0.92
VARS-216ENST00000428445 APOBEC3HQ6NTF7 200 aaKnown RBP20.79■□□□□ 0.92
VARS-216ENST00000428445 ZKSCAN4Q969J2 545 aaPredicted RBP20.79■□□□□ 0.92
VARS-216ENST00000428445 TEKT1Q969V4 418 aa20.79■□□□□ 0.92
VARS-216ENST00000428445 ECM2O94769 699 aaPredicted RBP20.78■□□□□ 0.92
VARS-216ENST00000428445 EN2P19622 333 aaPredicted RBP20.78■□□□□ 0.92
VARS-216ENST00000428445 FGFR2P21802 821 aa20.78■□□□□ 0.92
VARS-216ENST00000428445 KIAA0100Q14667 2235 aaKnown RBP20.77■□□□□ 0.92
VARS-216ENST00000428445 ZSWIM8A7E2V4 1837 aa20.77■□□□□ 0.92
VARS-216ENST00000428445 RFX5P48382 616 aaPredicted RBP20.77■□□□□ 0.92
VARS-216ENST00000428445 TAF1CQ15572 869 aaPredicted RBP20.77■□□□□ 0.92
VARS-216ENST00000428445 MIGA2Q7L4E1 593 aa20.77■□□□□ 0.92
VARS-216ENST00000428445 TBC1D22AQ8WUA7 517 aa20.77■□□□□ 0.92
VARS-216ENST00000428445 CDCA7LQ96GN5 454 aa20.77■□□□□ 0.92
VARS-216ENST00000428445 ZDHHC15Q96MV8 337 aa20.77■□□□□ 0.92
VARS-216ENST00000428445 CSADQ9Y600 493 aa20.77■□□□□ 0.92
VARS-216ENST00000428445 SNCAIPQ9Y6H5 919 aa20.77■□□□□ 0.92
VARS-216ENST00000428445 GTF2A2P52657 109 aa20.76■□□□□ 0.91
VARS-216ENST00000428445 HDLBPQ00341 1268 aaKnown RBP20.76■□□□□ 0.91
VARS-216ENST00000428445 PTPRCP08575 1304 aa20.76■□□□□ 0.91
VARS-216ENST00000428445 MYCP01106 439 aaPredicted RBP20.75■□□□□ 0.91
VARS-216ENST00000428445 WRNIP1Q96S55 665 aa20.75■□□□□ 0.91
VARS-216ENST00000428445 ARHGAP39Q9C0H5 1083 aa20.75■□□□□ 0.91
VARS-216ENST00000428445 ZFYVE28Q9HCC9 887 aa20.75■□□□□ 0.91
VARS-216ENST00000428445 EYA2O00167 538 aa20.74■□□□□ 0.91
VARS-216ENST00000428445 IRF6O14896 467 aa20.74■□□□□ 0.91
VARS-216ENST00000428445 IFIT1P09914 478 aaKnown RBP20.74■□□□□ 0.91
VARS-216ENST00000428445 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
VARS-216ENST00000428445 PUM3Q15397 648 aaKnown RBP20.74■□□□□ 0.91
VARS-216ENST00000428445 INTS3Q68E01 1043 aaKnown RBP20.74■□□□□ 0.91
VARS-216ENST00000428445 ATG9AQ7Z3C6 839 aa20.74■□□□□ 0.91
VARS-216ENST00000428445 SIL1Q9H173 461 aa20.74■□□□□ 0.91
VARS-216ENST00000428445 PTCH2Q9Y6C5 1203 aa20.74■□□□□ 0.91
VARS-216ENST00000428445 AK9Q5TCS8 1911 aa20.73■□□□□ 0.91
VARS-216ENST00000428445 SPDYE5A6NIY4 337 aa20.73■□□□□ 0.91
VARS-216ENST00000428445 BTBD19C9JJ37 291 aa20.73■□□□□ 0.91
VARS-216ENST00000428445 TCP10Q12799 353 aa20.73■□□□□ 0.91
VARS-216ENST00000428445 ARMC5Q96C12 935 aa20.73■□□□□ 0.91
VARS-216ENST00000428445 TMOD2Q9NZR1 351 aa20.73■□□□□ 0.91
VARS-216ENST00000428445 MYH13Q9UKX3 1938 aa20.72■□□□□ 0.91
VARS-216ENST00000428445 E9PSI1 815 aa20.72■□□□□ 0.91
VARS-216ENST00000428445 INPP5BP32019 993 aa20.72■□□□□ 0.91
VARS-216ENST00000428445 DIXDC1Q155Q3 683 aa20.72■□□□□ 0.91
VARS-216ENST00000428445 FAM83AQ86UY5 434 aa20.72■□□□□ 0.91
VARS-216ENST00000428445 MRIQ9BWK5 157 aa20.72■□□□□ 0.91
VARS-216ENST00000428445 SLC5A1P13866 664 aa20.71■□□□□ 0.91
VARS-216ENST00000428445 HHIPL2Q6UWX4 724 aa20.71■□□□□ 0.91
VARS-216ENST00000428445 ERO1BQ86YB8 467 aa20.71■□□□□ 0.91
VARS-216ENST00000428445 PRDX5P30044 214 aa20.7■□□□□ 0.9
VARS-216ENST00000428445 NFIAQ12857 509 aa20.7■□□□□ 0.9
VARS-216ENST00000428445 CDC42EP5Q6NZY7 148 aa20.7■□□□□ 0.9
VARS-216ENST00000428445 LPIN2Q92539 896 aa20.7■□□□□ 0.9
VARS-216ENST00000428445 DAGLAQ9Y4D2 1042 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms