RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TMCO5BA8MYB1 307 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 NPM1P06748 294 aaKnown RBP eCLIP18.4■□□□□ 0.54
C9orf3-206ENST00000428313 ERCC3P19447 782 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 ELF1P32519 619 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 CCT5P48643 541 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 C11orf91Q3C1V1 193 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 CLASRPQ8N2M8 674 aaKnown RBP18.4■□□□□ 0.54
C9orf3-206ENST00000428313 TC2NQ8N9U0 490 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 RGPD1P0DJD0 1748 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 PFKFB2O60825 505 aa18.39■□□□□ 0.54
C9orf3-206ENST00000428313 SCRN1Q12765 414 aa18.39■□□□□ 0.54
C9orf3-206ENST00000428313 KIF4BQ2VIQ3 1234 aa18.39■□□□□ 0.54
C9orf3-206ENST00000428313 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.54
C9orf3-206ENST00000428313 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.54
C9orf3-206ENST00000428313 TMEM232C9JQI7 657 aa18.39■□□□□ 0.53
C9orf3-206ENST00000428313 BIN1O00499 593 aa18.39■□□□□ 0.53
C9orf3-206ENST00000428313 KIF5CO60282 957 aa18.39■□□□□ 0.53
C9orf3-206ENST00000428313 KARSQ15046 597 aaKnown RBP18.39■□□□□ 0.53
C9orf3-206ENST00000428313 NSUN7Q8NE18 718 aaKnown RBP18.39■□□□□ 0.53
C9orf3-206ENST00000428313 KCNG4Q8TDN1 519 aa18.39■□□□□ 0.53
C9orf3-206ENST00000428313 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
C9orf3-206ENST00000428313 FAM227BQ96M60 508 aa18.39■□□□□ 0.53
C9orf3-206ENST00000428313 CTAGE15A4D2H0 777 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 CTAGE8P0CG41 777 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 MCM3P25205 808 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 CTAGE6Q86UF2 777 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 CTAGE4Q8IX94 777 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 JPH2Q9BR39 696 aaPredicted RBP18.38■□□□□ 0.53
C9orf3-206ENST00000428313 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
C9orf3-206ENST00000428313 TUBE1Q9UJT0 475 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 CHUKO15111 745 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 RHOXF2BP0C7M4 288 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 HSP90B1P14625 803 aaKnown RBP18.38■□□□□ 0.53
C9orf3-206ENST00000428313 SCP2P22307 547 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 SF3B2Q13435 895 aaKnown RBP18.38■□□□□ 0.53
C9orf3-206ENST00000428313 PPP2R5AQ15172 486 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 USPL1Q5W0Q7 1092 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 ISM2Q6H9L7 571 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
C9orf3-206ENST00000428313 JMYQ8N9B5 988 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 RHOXF2Q9BQY4 288 aa18.38■□□□□ 0.53
C9orf3-206ENST00000428313 SHTN1A0MZ66 631 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 GOLIM4O00461 696 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 ALDH1L1O75891 902 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 FSBPO95073 299 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 YEATS4O95619 227 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 CPLX2Q6PUV4 134 aaKnown RBP18.37■□□□□ 0.53
C9orf3-206ENST00000428313 NME9Q86XW9 330 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 COG3Q96JB2 828 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 HPCAL4Q9UM19 191 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 CEP170BQ9Y4F5 1589 aaPredicted RBP18.37■□□□□ 0.53
C9orf3-206ENST00000428313 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 ZNF202O95125 648 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 IRAK1P51617 712 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 MTX1Q13505 466 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 PREPLQ4J6C6 727 aaPredicted RBP18.37■□□□□ 0.53
C9orf3-206ENST00000428313 Q6ZUG5 572 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 SPATS2Q86XZ4 545 aaKnown RBP18.37■□□□□ 0.53
C9orf3-206ENST00000428313 LINC00301Q8NCQ3 95 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 FAM76AQ8TAV0 307 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 INTS13Q9NVM9 706 aa18.37■□□□□ 0.53
C9orf3-206ENST00000428313 CTAGE9A4FU28 777 aa18.36■□□□□ 0.53
C9orf3-206ENST00000428313 RDXP35241 583 aaKnown RBP18.36■□□□□ 0.53
C9orf3-206ENST00000428313 FNTAP49354 379 aa18.36■□□□□ 0.53
C9orf3-206ENST00000428313 MAP2K1Q02750 393 aaPredicted RBP18.36■□□□□ 0.53
C9orf3-206ENST00000428313 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
C9orf3-206ENST00000428313 RRS1Q15050 365 aaKnown RBP18.36■□□□□ 0.53
C9orf3-206ENST00000428313 SPECC1LQ69YQ0 1117 aa18.36■□□□□ 0.53
C9orf3-206ENST00000428313 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
C9orf3-206ENST00000428313 ZC3H4Q9UPT8 1303 aaKnown RBP18.36■□□□□ 0.53
C9orf3-206ENST00000428313 AMPHP49418 695 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 SGSM3Q96HU1 749 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 FAXDC2Q96IV6 333 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 AGLP35573 1532 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 PTPDC1A2A3K4 754 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
C9orf3-206ENST00000428313 DESI2Q9BSY9 194 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 NAA15Q9BXJ9 866 aaKnown RBP18.35■□□□□ 0.53
C9orf3-206ENST00000428313 KAT14Q9H8E8 782 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 SALL1Q9NSC2 1324 aa18.35■□□□□ 0.53
C9orf3-206ENST00000428313 A0A0D9SFI3 127 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 OS9Q13438 667 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-206ENST00000428313 STK38Q15208 465 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 SF3A1Q15459 793 aaKnown RBP18.34■□□□□ 0.53
C9orf3-206ENST00000428313 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-206ENST00000428313 FMNL3Q8IVF7 1028 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 PDILTQ8N807 584 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 PANX2Q96RD6 677 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms