RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 IFNL3Q8IZI9 196 aa12.27□□□□□ -0.44
HDAC9-210ENST00000428307 LCORLQ8N3X6 602 aa12.27□□□□□ -0.44
HDAC9-210ENST00000428307 SYCE3A1L190 88 aa12.27□□□□□ -0.45
HDAC9-210ENST00000428307 CTDNEP1O95476 244 aa12.27□□□□□ -0.45
HDAC9-210ENST00000428307 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.45
HDAC9-210ENST00000428307 NSUN7Q8NE18 718 aaKnown RBP12.27□□□□□ -0.45
HDAC9-210ENST00000428307 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.45
HDAC9-210ENST00000428307 NAPBQ9H115 298 aa12.27□□□□□ -0.45
HDAC9-210ENST00000428307 EPB41L4AQ9HCS5 686 aaPredicted RBP12.27□□□□□ -0.45
HDAC9-210ENST00000428307 ZNF804BA4D1E1 1349 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 PTPDC1A2A3K4 754 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 H3BQV1 296 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 CYP7A1P22680 504 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 ADGRA1Q86SQ6 560 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 CNBD1Q8NA66 436 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
HDAC9-210ENST00000428307 ISY1Q9ULR0 285 aaKnown RBP12.26□□□□□ -0.45
HDAC9-210ENST00000428307 SLC4A4Q9Y6R1 1079 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 GSG1L2A8MUP6 293 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 B4E1Z4 1266 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 ZNF445P59923 1031 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 CTDSPL2Q05D32 466 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 SMARCC2Q8TAQ2 1214 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 NHSQ6T4R5 1651 aa12.26□□□□□ -0.45
HDAC9-210ENST00000428307 TAF1P21675 1872 aa12.25□□□□□ -0.45
HDAC9-210ENST00000428307 BCORQ6W2J9 1755 aa12.25□□□□□ -0.45
HDAC9-210ENST00000428307 PDIA4P13667 645 aaKnown RBP12.25□□□□□ -0.45
HDAC9-210ENST00000428307 CYB5R4Q7L1T6 521 aa12.25□□□□□ -0.45
HDAC9-210ENST00000428307 TXNRD3Q86VQ6 643 aa12.25□□□□□ -0.45
HDAC9-210ENST00000428307 LLPHQ9BRT6 129 aaKnown RBP12.25□□□□□ -0.45
HDAC9-210ENST00000428307 JAG2Q9Y219 1238 aa12.25□□□□□ -0.45
HDAC9-210ENST00000428307 TDO2P48775 406 aa12.25□□□□□ -0.45
HDAC9-210ENST00000428307 TMEM87AQ8NBN3 555 aa12.25□□□□□ -0.45
HDAC9-210ENST00000428307 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 GOLGA8BA8MQT2 603 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 GYS1P13807 737 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 HIBADHP31937 336 aaKnown RBP12.24□□□□□ -0.45
HDAC9-210ENST00000428307 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 FBXL16Q8N461 479 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 SDR42E1Q8WUS8 393 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 NEDD4P46934 1319 aa12.24□□□□□ -0.45
HDAC9-210ENST00000428307 EVCP57679 992 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 UBE2HP62256 183 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 KRT85P78386 507 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 GUCY1B3Q02153 619 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 CHAF1AQ13111 956 aaPredicted RBP12.23□□□□□ -0.45
HDAC9-210ENST00000428307 ALX1Q15699 326 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 NACAP1Q9BZK3 213 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 MYO5AQ9Y4I1 1855 aaKnown RBP12.23□□□□□ -0.45
HDAC9-210ENST00000428307 ADRA2BP18089 450 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 RXRAP19793 462 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 HMGN5P82970 282 aaKnown RBP12.23□□□□□ -0.45
HDAC9-210ENST00000428307 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
HDAC9-210ENST00000428307 PROM2Q8N271 834 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 SENP2Q9HC62 589 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
HDAC9-210ENST00000428307 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 KDM4AO75164 1064 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 GNAT2P19087 354 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 TTC6Q86TZ1 520 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 ANGEL1Q9UNK9 670 aaKnown RBP12.22□□□□□ -0.45
HDAC9-210ENST00000428307 TACC3Q9Y6A5 838 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 COL1A1P02452 1464 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-210ENST00000428307 CPLX1O14810 134 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 SERPINB2P05120 415 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 FDPSP14324 419 aaKnown RBP12.22□□□□□ -0.45
HDAC9-210ENST00000428307 DYNLL1P63167 89 aaKnown RBP12.22□□□□□ -0.45
HDAC9-210ENST00000428307 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 ZNF384Q8TF68 577 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 SYAP1Q96A49 352 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-210ENST00000428307 RBSNQ9H1K0 784 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 ZSWIM5Q9P217 1185 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 PNPLA7Q6ZV29 1317 aa12.22□□□□□ -0.45
HDAC9-210ENST00000428307 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 SMIM22K7EJ46 135 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
HDAC9-210ENST00000428307 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
HDAC9-210ENST00000428307 GRAPQ13588 217 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 TXNRD1Q16881 649 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 NAA16Q6N069 864 aaPredicted RBP12.21□□□□□ -0.45
HDAC9-210ENST00000428307 LRSAM1Q6UWE0 723 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 MFSD6Q6ZSS7 791 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 CCDC144CPQ8IYA2 1237 aa12.21□□□□□ -0.45
HDAC9-210ENST00000428307 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.45
HDAC9-210ENST00000428307 PRDX5P30044 214 aa12.21□□□□□ -0.46
HDAC9-210ENST00000428307 ADD1P35611 737 aaKnown RBP12.21□□□□□ -0.46
HDAC9-210ENST00000428307 RESTQ13127 1097 aa12.21□□□□□ -0.46
HDAC9-210ENST00000428307 AKNAD1Q5T1N1 836 aa12.21□□□□□ -0.46
HDAC9-210ENST00000428307 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms