RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 CCDC24Q8N4L8 307 aa20.34■□□□□ 0.85
PRDM5-203ENST00000428209 NBPF3Q9H094 633 aa20.34■□□□□ 0.85
PRDM5-203ENST00000428209 PHF14O94880 888 aa20.33■□□□□ 0.85
PRDM5-203ENST00000428209 TRAPPC3LQ5T215 181 aa20.33■□□□□ 0.85
PRDM5-203ENST00000428209 ARMT1Q9H993 441 aa20.33■□□□□ 0.85
PRDM5-203ENST00000428209 KIF3AQ9Y496 699 aa20.33■□□□□ 0.85
PRDM5-203ENST00000428209 CASZ1Q86V15 1759 aa20.33■□□□□ 0.85
PRDM5-203ENST00000428209 ANTXR2P58335 489 aa20.33■□□□□ 0.84
PRDM5-203ENST00000428209 RPS8P62241 208 aaKnown RBP20.33■□□□□ 0.84
PRDM5-203ENST00000428209 CAVIN4Q5BKX8 364 aa20.33■□□□□ 0.84
PRDM5-203ENST00000428209 TBC1D10CQ8IV04 446 aa20.33■□□□□ 0.84
PRDM5-203ENST00000428209 RBSNQ9H1K0 784 aa20.33■□□□□ 0.84
PRDM5-203ENST00000428209 ZNF804BA4D1E1 1349 aa20.33■□□□□ 0.84
PRDM5-203ENST00000428209 NPHP1O15259 732 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 ALX1Q15699 326 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 VPS37DQ86XT2 251 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 IFNL3Q8IZI9 196 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 WDR19Q8NEZ3 1342 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 LY75O60449 1722 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 NAPBQ9H115 298 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 SBF2Q86WG5 1849 aa20.32■□□□□ 0.84
PRDM5-203ENST00000428209 TAF1LQ8IZX4 1826 aa20.31■□□□□ 0.84
PRDM5-203ENST00000428209 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
PRDM5-203ENST00000428209 FAM196AQ6ZSG2 479 aa20.31■□□□□ 0.84
PRDM5-203ENST00000428209 ABCF2Q9UG63 623 aa20.31■□□□□ 0.84
PRDM5-203ENST00000428209 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
PRDM5-203ENST00000428209 DENND2AQ9ULE3 1009 aa20.31■□□□□ 0.84
PRDM5-203ENST00000428209 PPFIA3O75145 1194 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 CCDC183Q5T5S1 534 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 TTC6Q86TZ1 520 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 BCL11BQ9C0K0 894 aaPredicted RBP20.3■□□□□ 0.84
PRDM5-203ENST00000428209 SCAND2PQ9GZW5 306 aaPredicted RBP20.3■□□□□ 0.84
PRDM5-203ENST00000428209 ZSCAN16Q9H4T2 348 aaPredicted RBP20.3■□□□□ 0.84
PRDM5-203ENST00000428209 EPB41L4AQ9HCS5 686 aaPredicted RBP20.3■□□□□ 0.84
PRDM5-203ENST00000428209 TFIP11Q9UBB9 837 aaKnown RBP20.3■□□□□ 0.84
PRDM5-203ENST00000428209 GNAT2P19087 354 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 RESTQ13127 1097 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 LCORLQ8N3X6 602 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 RTN4Q9NQC3 1192 aaKnown RBP20.3■□□□□ 0.84
PRDM5-203ENST00000428209 ZMYM6O95789 1325 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 SALL1Q9NSC2 1324 aa20.3■□□□□ 0.84
PRDM5-203ENST00000428209 COL24A1Q17RW2 1714 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 GOLGA8BA8MQT2 603 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 GSG1L2A8MUP6 293 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 DHX16O60231 1041 aaKnown RBP20.29■□□□□ 0.84
PRDM5-203ENST00000428209 FOSBP53539 338 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 FAM84BQ96KN1 310 aaPredicted RBP20.29■□□□□ 0.84
PRDM5-203ENST00000428209 RAI14Q9P0K7 980 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 SLC4A4Q9Y6R1 1079 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 C4BP0C0L5 1744 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 A0A1B0GUL6 1792 aa20.29■□□□□ 0.84
PRDM5-203ENST00000428209 B4E1Z4 1266 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 PRKAB2O43741 272 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 CYP7A1P22680 504 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 NAA16Q6N069 864 aaPredicted RBP20.28■□□□□ 0.84
PRDM5-203ENST00000428209 CYB5R4Q7L1T6 521 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 MIGA1Q8NAN2 632 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 NACAP1Q9BZK3 213 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
PRDM5-203ENST00000428209 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 ELP1O95163 1332 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 PNPLA7Q6ZV29 1317 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 SPATA32Q96LK8 384 aa20.28■□□□□ 0.84
PRDM5-203ENST00000428209 ANGEL1Q9UNK9 670 aaKnown RBP20.28■□□□□ 0.84
PRDM5-203ENST00000428209 ANKRD2Q9GZV1 360 aa20.27■□□□□ 0.84
PRDM5-203ENST00000428209 TSPY26PQ9H489 355 aa20.27■□□□□ 0.84
PRDM5-203ENST00000428209 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.84
PRDM5-203ENST00000428209 TDO2P48775 406 aa20.27■□□□□ 0.84
PRDM5-203ENST00000428209 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.84
PRDM5-203ENST00000428209 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
PRDM5-203ENST00000428209 NKX2-3Q8TAU0 364 aa20.27■□□□□ 0.84
PRDM5-203ENST00000428209 NEDD4P46934 1319 aa20.26■□□□□ 0.83
PRDM5-203ENST00000428209 LETM1O95202 739 aaPredicted RBP20.26■□□□□ 0.83
PRDM5-203ENST00000428209 INCENPQ9NQS7 918 aa20.26■□□□□ 0.83
PRDM5-203ENST00000428209 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
PRDM5-203ENST00000428209 CPLX1O14810 134 aa20.26■□□□□ 0.83
PRDM5-203ENST00000428209 FDPSP14324 419 aaKnown RBP20.26■□□□□ 0.83
PRDM5-203ENST00000428209 TM4SF1P30408 202 aa20.26■□□□□ 0.83
PRDM5-203ENST00000428209 NFIXQ14938 502 aa20.26■□□□□ 0.83
PRDM5-203ENST00000428209 ZNF772Q68DY9 489 aaPredicted RBP20.26■□□□□ 0.83
PRDM5-203ENST00000428209 FBXO33Q7Z6M2 555 aa20.26■□□□□ 0.83
PRDM5-203ENST00000428209 ADGRA1Q86SQ6 560 aa20.25■□□□□ 0.83
PRDM5-203ENST00000428209 LEO1Q8WVC0 666 aaPredicted RBP20.25■□□□□ 0.83
PRDM5-203ENST00000428209 COL1A1P02452 1464 aaPredicted RBP20.25■□□□□ 0.83
PRDM5-203ENST00000428209 GOLGA6L4A6NEF3 574 aa20.25■□□□□ 0.83
PRDM5-203ENST00000428209 SH2B2O14492 632 aaPredicted RBP20.25■□□□□ 0.83
PRDM5-203ENST00000428209 KLRK1P26718 216 aa20.25■□□□□ 0.83
PRDM5-203ENST00000428209 CCDC173Q0VFZ6 552 aa20.25■□□□□ 0.83
PRDM5-203ENST00000428209 TMEM87BQ96K49 555 aa20.25■□□□□ 0.83
PRDM5-203ENST00000428209 CFAP45Q9UL16 551 aa20.25■□□□□ 0.83
PRDM5-203ENST00000428209 C4AP0C0L4 1744 aa20.25■□□□□ 0.83
PRDM5-203ENST00000428209 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
PRDM5-203ENST00000428209 GUCY1B3Q02153 619 aa20.24■□□□□ 0.83
PRDM5-203ENST00000428209 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
PRDM5-203ENST00000428209 CNNM2Q9H8M5 875 aa20.24■□□□□ 0.83
PRDM5-203ENST00000428209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.24■□□□□ 0.83
PRDM5-203ENST00000428209 ADRA2BP18089 450 aa20.24■□□□□ 0.83
PRDM5-203ENST00000428209 HIBADHP31937 336 aaKnown RBP20.24■□□□□ 0.83
PRDM5-203ENST00000428209 MFSD6Q6ZSS7 791 aa20.24■□□□□ 0.83
PRDM5-203ENST00000428209 TFCP2L1Q9NZI6 479 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms