RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 USP44Q9H0E7 712 aa21.86■■□□□ 1.09
DDR1-235ENST00000428153 FZD1Q9UP38 647 aa21.86■■□□□ 1.09
DDR1-235ENST00000428153 SUGT1Q9Y2Z0 365 aa21.86■■□□□ 1.09
DDR1-235ENST00000428153 CRKP46108 304 aa21.85■■□□□ 1.09
DDR1-235ENST00000428153 TNNI2P48788 182 aa21.85■■□□□ 1.09
DDR1-235ENST00000428153 LRRC24Q50LG9 513 aa21.85■■□□□ 1.09
DDR1-235ENST00000428153 OTUD7BQ6GQQ9 843 aa21.85■■□□□ 1.09
DDR1-235ENST00000428153 CLMNQ96JQ2 1002 aa21.85■■□□□ 1.09
DDR1-235ENST00000428153 TEPSINQ96N21 525 aa21.84■■□□□ 1.09
DDR1-235ENST00000428153 TDRD3Q9H7E2 651 aaKnown RBP21.84■■□□□ 1.09
DDR1-235ENST00000428153 HTTP42858 3142 aa21.83■■□□□ 1.09
DDR1-235ENST00000428153 TESPA1A2RU30 521 aaPredicted RBP21.83■■□□□ 1.09
DDR1-235ENST00000428153 CT47B1P0C2W7 299 aaPredicted RBP21.83■■□□□ 1.09
DDR1-235ENST00000428153 MAST3O60307 1309 aa21.82■■□□□ 1.08
DDR1-235ENST00000428153 FRAT2O75474 233 aaPredicted RBP21.82■■□□□ 1.08
DDR1-235ENST00000428153 IFIT1P09914 478 aaKnown RBP21.82■■□□□ 1.08
DDR1-235ENST00000428153 SOX10P56693 466 aa21.82■■□□□ 1.08
DDR1-235ENST00000428153 PUM3Q15397 648 aaKnown RBP21.82■■□□□ 1.08
DDR1-235ENST00000428153 R3HDMLQ9H3Y0 253 aa21.82■■□□□ 1.08
DDR1-235ENST00000428153 FBXO3Q9UK99 471 aa21.82■■□□□ 1.08
DDR1-235ENST00000428153 IGF2BP3O00425 579 aaKnown RBP eCLIP21.81■■□□□ 1.08
DDR1-235ENST00000428153 FGFR2P21802 821 aa21.81■■□□□ 1.08
DDR1-235ENST00000428153 FKBP1CQ5VVH2 108 aa21.81■■□□□ 1.08
DDR1-235ENST00000428153 TEKT1Q969V4 418 aa21.81■■□□□ 1.08
DDR1-235ENST00000428153 ZDHHC15Q96MV8 337 aa21.81■■□□□ 1.08
DDR1-235ENST00000428153 FAM83AQ86UY5 434 aa21.8■■□□□ 1.08
DDR1-235ENST00000428153 TRMT2AQ8IZ69 625 aaKnown RBP21.8■■□□□ 1.08
DDR1-235ENST00000428153 OTOFQ9HC10 1997 aa21.79■■□□□ 1.08
DDR1-235ENST00000428153 EYA2O00167 538 aa21.79■■□□□ 1.08
DDR1-235ENST00000428153 GJA5P36382 358 aa21.79■■□□□ 1.08
DDR1-235ENST00000428153 RFX5P48382 616 aaPredicted RBP21.79■■□□□ 1.08
DDR1-235ENST00000428153 LPIN2Q92539 896 aa21.79■■□□□ 1.08
DDR1-235ENST00000428153 HOOK2Q96ED9 719 aa21.79■■□□□ 1.08
DDR1-235ENST00000428153 HDAC5Q9UQL6 1122 aa21.79■■□□□ 1.08
DDR1-235ENST00000428153 TCP10L2B9ZVM9 353 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 SLC34A2O95436 690 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 BCAMP50895 628 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 MAP3K9P80192 1104 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 CHAF1AQ13111 956 aaPredicted RBP21.78■■□□□ 1.08
DDR1-235ENST00000428153 HHIPL2Q6UWX4 724 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.78■■□□□ 1.08
DDR1-235ENST00000428153 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.78■■□□□ 1.08
DDR1-235ENST00000428153 ERO1AQ96HE7 468 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 TMEM39BQ9GZU3 492 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 SMC4Q9NTJ3 1288 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 TMOD2Q9NZR1 351 aa21.78■■□□□ 1.08
DDR1-235ENST00000428153 IQSEC3Q9UPP2 1182 aaPredicted RBP21.78■■□□□ 1.08
DDR1-235ENST00000428153 RPAP1Q9BWH6 1393 aaPredicted RBP21.77■■□□□ 1.08
DDR1-235ENST00000428153 ZBTB22O15209 634 aa21.77■■□□□ 1.08
DDR1-235ENST00000428153 SLC5A1P13866 664 aa21.77■■□□□ 1.08
DDR1-235ENST00000428153 GRIK5Q16478 980 aa21.77■■□□□ 1.08
DDR1-235ENST00000428153 KLHDC4Q8TBB5 520 aa21.77■■□□□ 1.08
DDR1-235ENST00000428153 WDR66Q8TBY9 1149 aa21.77■■□□□ 1.08
DDR1-235ENST00000428153 OPTNQ96CV9 577 aa21.77■■□□□ 1.08
DDR1-235ENST00000428153 CIAO1O76071 339 aa21.76■■□□□ 1.07
DDR1-235ENST00000428153 MS4A4AQ96JQ5 239 aa21.76■■□□□ 1.07
DDR1-235ENST00000428153 PTPN18Q99952 460 aa21.76■■□□□ 1.07
DDR1-235ENST00000428153 CSADQ9Y600 493 aa21.76■■□□□ 1.07
DDR1-235ENST00000428153 CENPFP49454 3210 aa21.75■■□□□ 1.07
DDR1-235ENST00000428153 GTF2A2P52657 109 aa21.75■■□□□ 1.07
DDR1-235ENST00000428153 CRHR2Q13324 411 aa21.75■■□□□ 1.07
DDR1-235ENST00000428153 INTS3Q68E01 1043 aaKnown RBP21.75■■□□□ 1.07
DDR1-235ENST00000428153 APOBEC3HQ6NTF7 200 aaKnown RBP21.75■■□□□ 1.07
DDR1-235ENST00000428153 OTOP1Q7RTM1 612 aa21.75■■□□□ 1.07
DDR1-235ENST00000428153 ELP3Q9H9T3 547 aa21.75■■□□□ 1.07
DDR1-235ENST00000428153 UBTFL1P0CB47 393 aaPredicted RBP21.74■■□□□ 1.07
DDR1-235ENST00000428153 VGLL4Q14135 290 aa21.74■■□□□ 1.07
DDR1-235ENST00000428153 ATG9AQ7Z3C6 839 aa21.74■■□□□ 1.07
DDR1-235ENST00000428153 CDAN1Q8IWY9 1227 aa21.74■■□□□ 1.07
DDR1-235ENST00000428153 TRIM17Q9Y577 477 aa21.74■■□□□ 1.07
DDR1-235ENST00000428153 SPDYE5A6NIY4 337 aa21.73■■□□□ 1.07
DDR1-235ENST00000428153 CDCA7LQ96GN5 454 aa21.73■■□□□ 1.07
DDR1-235ENST00000428153 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
DDR1-235ENST00000428153 ZCCHC17Q9NP64 241 aaKnown RBP21.73■■□□□ 1.07
DDR1-235ENST00000428153 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.73■■□□□ 1.07
DDR1-235ENST00000428153 MYH13Q9UKX3 1938 aa21.72■■□□□ 1.07
DDR1-235ENST00000428153 SP3Q02447 781 aa21.72■■□□□ 1.07
DDR1-235ENST00000428153 DCAF15Q66K64 600 aa21.72■■□□□ 1.07
DDR1-235ENST00000428153 SEMA3EO15041 775 aa21.71■■□□□ 1.07
DDR1-235ENST00000428153 ARHGEF6Q15052 776 aa21.71■■□□□ 1.07
DDR1-235ENST00000428153 ERO1BQ86YB8 467 aa21.71■■□□□ 1.07
DDR1-235ENST00000428153 BRI3BPQ8WY22 251 aa21.71■■□□□ 1.07
DDR1-235ENST00000428153 GNL3LQ9NVN8 582 aaKnown RBP21.71■■□□□ 1.07
DDR1-235ENST00000428153 CEP126Q9P2H0 1117 aa21.71■■□□□ 1.07
DDR1-235ENST00000428153 SALL1Q9NSC2 1324 aa21.71■■□□□ 1.07
DDR1-235ENST00000428153 CCL15-CCL14A0A0B4J2E2 113 aa21.7■■□□□ 1.06
DDR1-235ENST00000428153 IL15P40933 162 aaPredicted RBP21.7■■□□□ 1.06
DDR1-235ENST00000428153 CCL15Q16663 113 aa21.7■■□□□ 1.06
DDR1-235ENST00000428153 PRPF38BQ5VTL8 546 aaKnown RBP21.7■■□□□ 1.06
DDR1-235ENST00000428153 EFCC1Q9HA90 598 aa21.7■■□□□ 1.06
DDR1-235ENST00000428153 ZFYVE28Q9HCC9 887 aa21.7■■□□□ 1.06
DDR1-235ENST00000428153 WDHD1O75717 1129 aaPredicted RBP21.69■■□□□ 1.06
DDR1-235ENST00000428153 CACNB3P54284 484 aa21.69■■□□□ 1.06
DDR1-235ENST00000428153 ATP2B3Q16720 1220 aa21.69■■□□□ 1.06
DDR1-235ENST00000428153 FAM151AQ8WW52 585 aa21.69■■□□□ 1.06
DDR1-235ENST00000428153 ARHGAP45Q92619 1136 aa21.69■■□□□ 1.06
DDR1-235ENST00000428153 NOB1Q9ULX3 412 aaKnown RBP21.69■■□□□ 1.06
DDR1-235ENST00000428153 PTPN22Q9Y2R2 807 aa21.69■■□□□ 1.06
DDR1-235ENST00000428153 SNCAIPQ9Y6H5 919 aa21.69■■□□□ 1.06
DDR1-235ENST00000428153 MKI67P46013 3256 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms