RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 CCT2P78371 535 aaKnown RBP25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 LCORLQ8N3X6 602 aa25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 PATL2C9JE40 543 aaKnown RBP25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 PDIA4P13667 645 aaKnown RBP25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 ANTXR2P58335 489 aa25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 FBXL16Q8N461 479 aa25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 MIGA1Q8NAN2 632 aa25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 DDX11Q96FC9 970 aa25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 DENND2AQ9ULE3 1009 aa25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 CACNA1SQ13698 1873 aa25.67■■□□□ 1.7
CNEP1R1-202ENST00000427478 PDIA3P30101 505 aaKnown RBP25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 PRR5LQ6MZQ0 368 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 GAS2L3Q86XJ1 694 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 IFNL3Q8IZI9 196 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 ZNF274Q96GC6 653 aaPredicted RBP25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 NAPBQ9H115 298 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 RAI14Q9P0K7 980 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 ZMYM6O95789 1325 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 GADD45BO75293 160 aaPredicted RBP25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 TRDNQ13061 729 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 ALX1Q15699 326 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 FBXO33Q7Z6M2 555 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 FERMT3Q86UX7 667 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 TMEM87AQ8NBN3 555 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 LLPHQ9BRT6 129 aaKnown RBP25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 NCOA5Q9HCD5 579 aaKnown RBP25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 TFCP2L1Q9NZI6 479 aa25.66■■□□□ 1.7
CNEP1R1-202ENST00000427478 CYP7A1P22680 504 aa25.65■■□□□ 1.7
CNEP1R1-202ENST00000427478 DNM1Q05193 864 aaKnown RBP25.65■■□□□ 1.7
CNEP1R1-202ENST00000427478 ZSCAN23Q3MJ62 389 aa25.65■■□□□ 1.7
CNEP1R1-202ENST00000427478 NSUN7Q8NE18 718 aaKnown RBP25.65■■□□□ 1.7
CNEP1R1-202ENST00000427478 SMARCC2Q8TAQ2 1214 aa25.65■■□□□ 1.7
CNEP1R1-202ENST00000427478 PNPLA7Q6ZV29 1317 aa25.65■■□□□ 1.7
CNEP1R1-202ENST00000427478 FIBPO43427 364 aa25.64■■□□□ 1.7
CNEP1R1-202ENST00000427478 PRKAB2O43741 272 aa25.64■■□□□ 1.7
CNEP1R1-202ENST00000427478 ADGRA1Q86SQ6 560 aa25.64■■□□□ 1.7
CNEP1R1-202ENST00000427478 ISY1Q9ULR0 285 aaKnown RBP25.64■■□□□ 1.7
CNEP1R1-202ENST00000427478 GSG1L2A8MUP6 293 aa25.64■■□□□ 1.69
CNEP1R1-202ENST00000427478 CTDNEP1O95476 244 aa25.64■■□□□ 1.69
CNEP1R1-202ENST00000427478 GRAPQ13588 217 aa25.64■■□□□ 1.69
CNEP1R1-202ENST00000427478 GRAPLQ8TC17 118 aaPredicted RBP25.64■■□□□ 1.69
CNEP1R1-202ENST00000427478 SLC4A4Q9Y6R1 1079 aa25.64■■□□□ 1.69
CNEP1R1-202ENST00000427478 TIAM2Q8IVF5 1701 aa25.64■■□□□ 1.69
CNEP1R1-202ENST00000427478 XRCC6P12956 609 aaKnown RBP eCLIP25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 TXNRD1Q16881 649 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 SLC51AQ86UW1 340 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 FAM184AQ8NB25 1140 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 TMEM63CQ9P1W3 806 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 WDR19Q8NEZ3 1342 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 PTPDC1A2A3K4 754 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 GNAT2P19087 354 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 EVCP57679 992 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 NKX2-3Q8TAU0 364 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 GRPEL1Q9HAV7 217 aa25.63■■□□□ 1.69
CNEP1R1-202ENST00000427478 HIBADHP31937 336 aaKnown RBP25.62■■□□□ 1.69
CNEP1R1-202ENST00000427478 MRE11P49959 708 aa25.62■■□□□ 1.69
CNEP1R1-202ENST00000427478 PROM2Q8N271 834 aa25.62■■□□□ 1.69
CNEP1R1-202ENST00000427478 BRPF3Q9ULD4 1205 aa25.62■■□□□ 1.69
CNEP1R1-202ENST00000427478 NEDD4P46934 1319 aa25.62■■□□□ 1.69
CNEP1R1-202ENST00000427478 SEMA3EO15041 775 aa25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 SERPINB2P05120 415 aa25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 TDO2P48775 406 aa25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 RBM6P78332 1123 aaKnown RBP25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 CYB5R4Q7L1T6 521 aa25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 KLF18A0A0U1RQI7 1052 aa25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 B4E1Z4 1266 aa25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 ST5P78524 1137 aa25.61■■□□□ 1.69
CNEP1R1-202ENST00000427478 ZNF445P59923 1031 aa25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 CTDSPL2Q05D32 466 aa25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 NACAP1Q9BZK3 213 aa25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 HMGN5P82970 282 aaKnown RBP25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 TXNRD3Q86VQ6 643 aa25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 RPGRQ92834 1020 aaKnown RBP25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 INCENPQ9NQS7 918 aa25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 ANKIB1Q9P2G1 1089 aa25.6■■□□□ 1.69
CNEP1R1-202ENST00000427478 MAGEB6P1A0A0J9YX57 407 aa25.59■■□□□ 1.69
CNEP1R1-202ENST00000427478 GOLGA8BA8MQT2 603 aa25.59■■□□□ 1.69
CNEP1R1-202ENST00000427478 H3BQV1 296 aa25.59■■□□□ 1.69
CNEP1R1-202ENST00000427478 IFFO2Q5TF58 517 aa25.59■■□□□ 1.69
CNEP1R1-202ENST00000427478 ZNF772Q68DY9 489 aaPredicted RBP25.59■■□□□ 1.69
CNEP1R1-202ENST00000427478 FAM173BQ6P4H8 233 aa25.59■■□□□ 1.69
CNEP1R1-202ENST00000427478 MAST2Q6P0Q8 1798 aa25.59■■□□□ 1.69
CNEP1R1-202ENST00000427478 PPFIA3O75145 1194 aa25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 TPRNQ4KMQ1 711 aa25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 SALL1Q9NSC2 1324 aa25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 CCDC88AQ3V6T2 1871 aa25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 FOSBP53539 338 aa25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 CHAF1AQ13111 956 aaPredicted RBP25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 NAA16Q6N069 864 aaPredicted RBP25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 RAB11FIP4Q86YS3 637 aa25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 IRS2Q9Y4H2 1338 aa25.58■■□□□ 1.69
CNEP1R1-202ENST00000427478 DDR1Q08345 913 aa25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 CSPP1Q1MSJ5 1256 aa25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 ZNF384Q8TF68 577 aa25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 SDR42E1Q8WUS8 393 aa25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 PANK2Q9BZ23 570 aa25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 ANGEL1Q9UNK9 670 aaKnown RBP25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 PDS5AQ29RF7 1337 aaKnown RBP25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 MYH15Q9Y2K3 1946 aa25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 CHMP4CQ96CF2 233 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms