RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 LRP6O75581 1613 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 SPEF2Q9C093 1822 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 TPM2P07951 284 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 KCNQ4P56696 695 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
FIRRE-201ENST00000427391 C8orf76Q96K31 380 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.23
FIRRE-201ENST00000427391 NHSL1Q5SYE7 1610 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 NUP98P52948 1817 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 A0A1B0GVL5 298 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 CPLX1O14810 134 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
FIRRE-201ENST00000427391 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 LRMPQ12912 555 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 RASGRF1Q13972 1273 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 PHKBQ93100 1093 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 TACC3Q9Y6A5 838 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 NEDD4P46934 1319 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 PRKAB2O43741 272 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 ATP6V1AP38606 617 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 EVCP57679 992 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 INTS5Q6P9B9 1019 aaKnown RBP13.59□□□□□ -0.23
FIRRE-201ENST00000427391 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 TRIM5Q9C035 493 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
FIRRE-201ENST00000427391 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
FIRRE-201ENST00000427391 CRKLP46109 303 aaKnown RBP13.58□□□□□ -0.24
FIRRE-201ENST00000427391 BCAMP50895 628 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 ITPK1Q13572 414 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 DRC7Q8IY82 874 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 MAGEB6Q8N7X4 407 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 ARMT1Q9H993 441 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 MYH7P12883 1935 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 TCRBV5S4A2TA0A5A2 114 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 CCDC73Q6ZRK6 1079 aa13.58□□□□□ -0.24
FIRRE-201ENST00000427391 ZNF396Q96N95 335 aaPredicted RBP13.58□□□□□ -0.24
FIRRE-201ENST00000427391 EPB41L4AQ9HCS5 686 aaPredicted RBP13.58□□□□□ -0.24
FIRRE-201ENST00000427391 MBD4O95243 580 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 CDC27P30260 824 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 EIF5P55010 431 aaKnown RBP13.57□□□□□ -0.24
FIRRE-201ENST00000427391 PUM3Q15397 648 aaKnown RBP13.57□□□□□ -0.24
FIRRE-201ENST00000427391 CCDC186Q7Z3E2 898 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 ENGASEQ8NFI3 743 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 FBXO18Q8NFZ0 1043 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 FAM13BQ9NYF5 915 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 MYH3P11055 1940 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 SMIM22K7EJ46 135 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 FGFR2P21802 821 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 BRD2P25440 801 aaKnown RBP13.57□□□□□ -0.24
FIRRE-201ENST00000427391 TRDNQ13061 729 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 MIGA1Q8NAN2 632 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 SPATA5Q8NB90 893 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 LPIN2Q92539 896 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 STRBPQ96SI9 672 aaKnown RBP13.57□□□□□ -0.24
FIRRE-201ENST00000427391 KCNQ2O43526 872 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 ARID4AP29374 1257 aaPredicted RBP13.57□□□□□ -0.24
FIRRE-201ENST00000427391 NDUFA8P51970 172 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
FIRRE-201ENST00000427391 DHX37Q8IY37 1157 aaKnown RBP13.57□□□□□ -0.24
FIRRE-201ENST00000427391 MPHOSPH8Q99549 860 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 ZKSCAN3Q9BRR0 538 aa13.57□□□□□ -0.24
FIRRE-201ENST00000427391 MYH15Q9Y2K3 1946 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 ERVV-1B6SEH8 477 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 KINO60870 393 aaKnown RBP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 ZNF75DP51815 510 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 STK38Q15208 465 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 TICAM2Q86XR7 235 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 ARID3AQ99856 593 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 CCDC87Q9NVE4 849 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 FAM160A1Q05DH4 1040 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 UBE3CQ15386 1083 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 DDB1Q16531 1140 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
FIRRE-201ENST00000427391 TDRD7Q8NHU6 1098 aaKnown RBP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
FIRRE-201ENST00000427391 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
FIRRE-201ENST00000427391 ARID5BQ14865 1188 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 IQCB1Q15051 598 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 TTF1Q15361 905 aaPredicted RBP13.55□□□□□ -0.24
FIRRE-201ENST00000427391 MYSM1Q5VVJ2 828 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 KIAA1524Q8TCG1 905 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 COL4A1P02462 1669 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 LOC102724428A0A0B4J2F2 783 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 SH2B2O14492 632 aaPredicted RBP13.55□□□□□ -0.24
FIRRE-201ENST00000427391 SIK1P57059 783 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 CCDC144BQ3MJ40 725 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 APOA5Q6Q788 366 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 CCDC82Q8N4S0 544 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 TOMM22Q9NS69 142 aa13.55□□□□□ -0.24
FIRRE-201ENST00000427391 RTEL1Q9NZ71 1219 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms