RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 TNFAIP1Q13829 316 aa12.85□□□□□ -0.35
HDLBP-213ENST00000427007 FBXO46Q6PJ61 603 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-213ENST00000427007 DZIP1LQ8IYY4 767 aaKnown RBP12.85□□□□□ -0.35
HDLBP-213ENST00000427007 ANKRD13AQ8IZ07 590 aa12.85□□□□□ -0.35
HDLBP-213ENST00000427007 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
HDLBP-213ENST00000427007 PTPRCP08575 1304 aa12.85□□□□□ -0.35
HDLBP-213ENST00000427007 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
HDLBP-213ENST00000427007 INHBEP58166 350 aa12.84□□□□□ -0.35
HDLBP-213ENST00000427007 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
HDLBP-213ENST00000427007 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
HDLBP-213ENST00000427007 UNCXA6NJT0 531 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 PDE8BO95263 885 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 SLC34A2O95436 690 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 CACNB3P54284 484 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 TEPSINQ96N21 525 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 TMEM39BQ9GZU3 492 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 TRIM17Q9Y577 477 aa12.83□□□□□ -0.36
HDLBP-213ENST00000427007 E9PSI1 815 aa12.82□□□□□ -0.36
HDLBP-213ENST00000427007 TNNI2P48788 182 aa12.82□□□□□ -0.36
HDLBP-213ENST00000427007 BCAMP50895 628 aa12.82□□□□□ -0.36
HDLBP-213ENST00000427007 CRHR2Q13324 411 aa12.82□□□□□ -0.36
HDLBP-213ENST00000427007 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
HDLBP-213ENST00000427007 PTPN18Q99952 460 aa12.82□□□□□ -0.36
HDLBP-213ENST00000427007 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
HDLBP-213ENST00000427007 SLFN5Q08AF3 891 aa12.81□□□□□ -0.36
HDLBP-213ENST00000427007 OTUD7BQ6GQQ9 843 aa12.81□□□□□ -0.36
HDLBP-213ENST00000427007 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-213ENST00000427007 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
HDLBP-213ENST00000427007 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
HDLBP-213ENST00000427007 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
HDLBP-213ENST00000427007 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
HDLBP-213ENST00000427007 VGLL4Q14135 290 aa12.8□□□□□ -0.36
HDLBP-213ENST00000427007 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
HDLBP-213ENST00000427007 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
HDLBP-213ENST00000427007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDLBP-213ENST00000427007 CD99L2Q8TCZ2 262 aa12.8□□□□□ -0.36
HDLBP-213ENST00000427007 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-213ENST00000427007 EYA2O00167 538 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 FGFR2P21802 821 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-213ENST00000427007 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
HDLBP-213ENST00000427007 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 CSADQ9Y600 493 aa12.79□□□□□ -0.36
HDLBP-213ENST00000427007 CCL15-CCL14A0A0B4J2E2 113 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 SLC5A1P13866 664 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 CAP1Q01518 475 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 CCL15Q16663 113 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 ALDH1L2Q3SY69 923 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 BRI3BPQ8WY22 251 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 ZDHHC15Q96MV8 337 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 SIL1Q9H173 461 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 TMOD2Q9NZR1 351 aa12.78□□□□□ -0.36
HDLBP-213ENST00000427007 GTF2A2P52657 109 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 SP3Q02447 781 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-213ENST00000427007 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.37
HDLBP-213ENST00000427007 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 LPIN2Q92539 896 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 WRNIP1Q96S55 665 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 MAST3O60307 1309 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
HDLBP-213ENST00000427007 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
HDLBP-213ENST00000427007 UBTFL1P0CB47 393 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-213ENST00000427007 PRPF38BQ5VTL8 546 aaKnown RBP12.76□□□□□ -0.37
HDLBP-213ENST00000427007 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
HDLBP-213ENST00000427007 FAM43AQ8N2R8 423 aa12.76□□□□□ -0.37
HDLBP-213ENST00000427007 ZKSCAN4Q969J2 545 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-213ENST00000427007 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
HDLBP-213ENST00000427007 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
HDLBP-213ENST00000427007 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
HDLBP-213ENST00000427007 RBBP6Q7Z6E9 1792 aaKnown RBP12.76□□□□□ -0.37
HDLBP-213ENST00000427007 HTTP42858 3142 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 SPDYE5A6NIY4 337 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 AK9Q5TCS8 1911 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 HHIPL2Q6UWX4 724 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 MIGA2Q7L4E1 593 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 WDR66Q8TBY9 1149 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 MRIQ9BWK5 157 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 ZFYVE28Q9HCC9 887 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 SUGT1Q9Y2Z0 365 aa12.75□□□□□ -0.37
HDLBP-213ENST00000427007 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-213ENST00000427007 PRDX5P30044 214 aa12.74□□□□□ -0.37
HDLBP-213ENST00000427007 TCP10Q12799 353 aa12.74□□□□□ -0.37
HDLBP-213ENST00000427007 ATP2B3Q16720 1220 aa12.74□□□□□ -0.37
HDLBP-213ENST00000427007 TRMT2AQ8IZ69 625 aaKnown RBP12.74□□□□□ -0.37
HDLBP-213ENST00000427007 PA2G4Q9UQ80 394 aaKnown RBP12.74□□□□□ -0.37
HDLBP-213ENST00000427007 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
HDLBP-213ENST00000427007 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
HDLBP-213ENST00000427007 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
HDLBP-213ENST00000427007 IRF6O14896 467 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms