RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 SUPT20HL1Q3ZLR7 823 aa13.35□□□□□ -0.27
LINC01238-202ENST00000426962 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
LINC01238-202ENST00000426962 TDRD3Q9H7E2 651 aaKnown RBP13.35□□□□□ -0.27
LINC01238-202ENST00000426962 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
LINC01238-202ENST00000426962 PNMA6EA0A0J9YXQ4 647 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 SEMA3EO15041 775 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 ZBTB22O15209 634 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 TFCP2Q12800 502 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 G3BP1Q13283 466 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC01238-202ENST00000426962 TNFAIP1Q13829 316 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 RASA3Q14644 834 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
LINC01238-202ENST00000426962 TEKT1Q969V4 418 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 COL1A1P02452 1464 aaPredicted RBP13.34□□□□□ -0.27
LINC01238-202ENST00000426962 MAST3O60307 1309 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 AOX1Q06278 1338 aa13.34□□□□□ -0.27
LINC01238-202ENST00000426962 PPP1R12BO60237 982 aaPredicted RBP13.33□□□□□ -0.28
LINC01238-202ENST00000426962 MS4A1P11836 297 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 RLBP1P12271 317 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 PHKA1P46020 1223 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 PRKG1Q13976 671 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 LDLRAD1Q5T700 205 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 CCDC102BQ68D86 513 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 HHIPL2Q6UWX4 724 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 RASAL3Q86YV0 1011 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 ZDHHC15Q96MV8 337 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 CSRNP1Q96S65 589 aa13.33□□□□□ -0.28
LINC01238-202ENST00000426962 ANGEL1Q9UNK9 670 aaKnown RBP13.33□□□□□ -0.28
LINC01238-202ENST00000426962 THSD7BQ9C0I4 1608 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 A0A1B0GUL7 405 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 ADORA1P30542 326 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 TNNI2P48788 182 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 POLA2Q14181 598 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 MAP3K11Q16584 847 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 NBPF12Q5TAG4 269 aaPredicted RBP13.32□□□□□ -0.28
LINC01238-202ENST00000426962 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 PAPPA2Q9BXP8 1791 aa13.32□□□□□ -0.28
LINC01238-202ENST00000426962 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
LINC01238-202ENST00000426962 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
LINC01238-202ENST00000426962 MVPQ14764 893 aaKnown RBP13.31□□□□□ -0.28
LINC01238-202ENST00000426962 APOBEC3HQ6NTF7 200 aaKnown RBP13.31□□□□□ -0.28
LINC01238-202ENST00000426962 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
LINC01238-202ENST00000426962 NEUROD6Q96NK8 337 aa13.31□□□□□ -0.28
LINC01238-202ENST00000426962 TSKSQ9UJT2 592 aa13.31□□□□□ -0.28
LINC01238-202ENST00000426962 SALL1Q9NSC2 1324 aa13.31□□□□□ -0.28
LINC01238-202ENST00000426962 USP2O75604 605 aaPredicted RBP13.3□□□□□ -0.28
LINC01238-202ENST00000426962 LDHBP07195 334 aaKnown RBP13.3□□□□□ -0.28
LINC01238-202ENST00000426962 ZGPATQ8N5A5 531 aaKnown RBP13.3□□□□□ -0.28
LINC01238-202ENST00000426962 PANK1Q8TE04 598 aa13.3□□□□□ -0.28
LINC01238-202ENST00000426962 SLC10A4Q96EP9 437 aa13.3□□□□□ -0.28
LINC01238-202ENST00000426962 RNF186Q9NXI6 227 aa13.3□□□□□ -0.28
LINC01238-202ENST00000426962 SAGE1Q9NXZ1 904 aa13.3□□□□□ -0.28
LINC01238-202ENST00000426962 FZD1Q9UP38 647 aa13.3□□□□□ -0.28
LINC01238-202ENST00000426962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.3□□□□□ -0.28
LINC01238-202ENST00000426962 SURF6O75683 361 aaKnown RBP13.29□□□□□ -0.28
LINC01238-202ENST00000426962 PRDX5P30044 214 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 IREB2P48200 963 aaKnown RBP13.29□□□□□ -0.28
LINC01238-202ENST00000426962 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 FKBP1CQ5VVH2 108 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 FAM83AQ86UY5 434 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 TEPSINQ96N21 525 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 RCAN3Q9UKA8 241 aa13.29□□□□□ -0.28
LINC01238-202ENST00000426962 TRPA1O75762 1119 aa13.28□□□□□ -0.28
LINC01238-202ENST00000426962 TM4SF4P48230 202 aa13.28□□□□□ -0.28
LINC01238-202ENST00000426962 CACNB3P54284 484 aa13.28□□□□□ -0.28
LINC01238-202ENST00000426962 OS9Q13438 667 aaPredicted RBP13.28□□□□□ -0.28
LINC01238-202ENST00000426962 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
LINC01238-202ENST00000426962 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
LINC01238-202ENST00000426962 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
LINC01238-202ENST00000426962 GPR108Q9NPR9 543 aa13.28□□□□□ -0.28
LINC01238-202ENST00000426962 NOP58Q9Y2X3 529 aaKnown RBP13.28□□□□□ -0.28
LINC01238-202ENST00000426962 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
LINC01238-202ENST00000426962 DIXDC1Q155Q3 683 aa13.27□□□□□ -0.29
LINC01238-202ENST00000426962 SPRYD7Q5W111 196 aa13.27□□□□□ -0.29
LINC01238-202ENST00000426962 ANKRD13AQ8IZ07 590 aa13.27□□□□□ -0.29
LINC01238-202ENST00000426962 ABCF2Q9UG63 623 aa13.27□□□□□ -0.29
LINC01238-202ENST00000426962 DAGLAQ9Y4D2 1042 aa13.27□□□□□ -0.29
LINC01238-202ENST00000426962 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.29
LINC01238-202ENST00000426962 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 INHBEP58166 350 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 SREBF2Q12772 1141 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
LINC01238-202ENST00000426962 TNNI3KQ59H18 835 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 CDC42EP5Q6NZY7 148 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 CEP85Q6P2H3 762 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 ARAP2Q8WZ64 1704 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 HOOK2Q96ED9 719 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
LINC01238-202ENST00000426962 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
LINC01238-202ENST00000426962 FPGT-TNNI3KV9GXZ4 949 aa13.26□□□□□ -0.29
LINC01238-202ENST00000426962 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 ZBTB48P10074 688 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms