RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 DPP8Q6V1X1 898 aaPredicted RBP9.24□□□□□ -0.93
LINC01049-201ENST00000426840 SSH3Q8TE77 659 aa9.24□□□□□ -0.93
LINC01049-201ENST00000426840 CRBNQ96SW2 442 aa9.24□□□□□ -0.93
LINC01049-201ENST00000426840 MPHOSPH8Q99549 860 aa9.24□□□□□ -0.93
LINC01049-201ENST00000426840 TMX4Q9H1E5 349 aaPredicted RBP9.24□□□□□ -0.93
LINC01049-201ENST00000426840 COPRSQ9NQ92 184 aa9.24□□□□□ -0.93
LINC01049-201ENST00000426840 POLLQ9UGP5 575 aa9.24□□□□□ -0.93
LINC01049-201ENST00000426840 EYA2O00167 538 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 IRF6O14896 467 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 SRGAP3O43295 1099 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 ATP2B4P23634 1241 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 SLC4A3P48751 1232 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 CHRNDQ07001 517 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 TAF7LQ5H9L4 462 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 C9orf131Q5VYM1 1079 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 CEP85Q6P2H3 762 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 ATG9AQ7Z3C6 839 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 SLF2Q8IX21 1173 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 HELBQ8NG08 1087 aaPredicted RBP9.23□□□□□ -0.93
LINC01049-201ENST00000426840 TBC1D16Q8TBP0 767 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 CCDC102AQ96A19 550 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 ANKRD2Q9GZV1 360 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 VPS33BQ9H267 617 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 TAOK3Q9H2K8 898 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
LINC01049-201ENST00000426840 ZNF277Q9NRM2 450 aaPredicted RBP9.23□□□□□ -0.93
LINC01049-201ENST00000426840 CNNM1Q9NRU3 951 aa9.23□□□□□ -0.93
LINC01049-201ENST00000426840 PA2G4Q9UQ80 394 aaKnown RBP9.23□□□□□ -0.93
LINC01049-201ENST00000426840 LRRC37AA6NMS7 1700 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 CCDC88AQ3V6T2 1871 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 SNAP23O00161 211 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 TAF5LO75529 589 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 LMNB1P20700 586 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 IARSP41252 1262 aaKnown RBP9.22□□□□□ -0.93
LINC01049-201ENST00000426840 RPAP2Q8IXW5 612 aaPredicted RBP9.22□□□□□ -0.93
LINC01049-201ENST00000426840 SUPT20HQ8NEM7 779 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 GPR101Q96P66 508 aaPredicted RBP9.22□□□□□ -0.93
LINC01049-201ENST00000426840 ANKIB1Q9P2G1 1089 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 LEMD3Q9Y2U8 911 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 XDHP47989 1333 aa9.22□□□□□ -0.93
LINC01049-201ENST00000426840 DUOX1Q9NRD9 1551 aa9.21□□□□□ -0.93
LINC01049-201ENST00000426840 C6orf229H3BNL8 230 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 ZMYND10O75800 440 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 CIAO1O76071 339 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 AOC3Q16853 763 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 WASHC4Q2M389 1173 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 VGLL2Q8N8G2 317 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 SIL1Q9H173 461 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 RNF181Q9P0P0 153 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 GGA1Q9UJY5 639 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 NOP58Q9Y2X3 529 aaKnown RBP9.21□□□□□ -0.94
LINC01049-201ENST00000426840 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 IRS2Q9Y4H2 1338 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 SPEF2Q9C093 1822 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 CHD4Q14839 1912 aa9.21□□□□□ -0.94
LINC01049-201ENST00000426840 LTBP1Q14766 1721 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 PPIP5K2O43314 1243 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 UFL1O94874 794 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 PDE8BO95263 885 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 FGFR2P21802 821 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 IL15P40933 162 aaPredicted RBP9.2□□□□□ -0.94
LINC01049-201ENST00000426840 C15orf52Q6ZUT6 534 aaKnown RBP9.2□□□□□ -0.94
LINC01049-201ENST00000426840 TXNRD3Q86VQ6 643 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 ZC3H12CQ9C0D7 883 aaKnown RBP9.2□□□□□ -0.94
LINC01049-201ENST00000426840 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
LINC01049-201ENST00000426840 ZNF804BA4D1E1 1349 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 MROH5Q6ZUA9 1318 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 COL4A5P29400 1685 aa9.2□□□□□ -0.94
LINC01049-201ENST00000426840 DICER1Q9UPY3 1922 aaKnown RBP9.19□□□□□ -0.94
LINC01049-201ENST00000426840 FZD9O00144 591 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 SURF6O75683 361 aaKnown RBP9.19□□□□□ -0.94
LINC01049-201ENST00000426840 SASH1O94885 1247 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 KLRK1P26718 216 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 APLP1P51693 650 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 G3BP1Q13283 466 aaKnown RBP eCLIP9.19□□□□□ -0.94
LINC01049-201ENST00000426840 UBE4AQ14139 1066 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 METTL24Q5JXM2 366 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 LARGE2Q8N3Y3 721 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 EYA3Q99504 573 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 CEP126Q9P2H0 1117 aa9.19□□□□□ -0.94
LINC01049-201ENST00000426840 YDJCA8MPS7 323 aa9.18□□□□□ -0.94
LINC01049-201ENST00000426840 IRX6P78412 446 aaPredicted RBP9.18□□□□□ -0.94
LINC01049-201ENST00000426840 TFCP2Q12800 502 aa9.18□□□□□ -0.94
LINC01049-201ENST00000426840 AAMPQ13685 434 aa9.18□□□□□ -0.94
LINC01049-201ENST00000426840 KCNQ5Q9NR82 932 aa9.18□□□□□ -0.94
LINC01049-201ENST00000426840 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
LINC01049-201ENST00000426840 GOLGB1Q14789 3259 aaKnown RBP9.17□□□□□ -0.94
LINC01049-201ENST00000426840 MED23Q9ULK4 1368 aa9.17□□□□□ -0.94
LINC01049-201ENST00000426840 DDX11L8A8MPP1 907 aa9.17□□□□□ -0.94
LINC01049-201ENST00000426840 HMMRO75330 724 aa9.17□□□□□ -0.94
LINC01049-201ENST00000426840 KCNJ4P48050 445 aa9.17□□□□□ -0.94
LINC01049-201ENST00000426840 TIMM10P62072 90 aa9.17□□□□□ -0.94
LINC01049-201ENST00000426840 MDM2Q00987 491 aaPredicted RBP9.17□□□□□ -0.94
LINC01049-201ENST00000426840 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
LINC01049-201ENST00000426840 RDH13Q8NBN7 331 aa9.17□□□□□ -0.94
LINC01049-201ENST00000426840 JDP2Q8WYK2 163 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms