RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 IVLP07476 585 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 RHOXF2BP0C7M4 288 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 KRT24Q2M2I5 525 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 RHOXF2Q9BQY4 288 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 POLKQ9UBT6 870 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 XRCC6P12956 609 aaKnown RBP eCLIP20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 SMC6Q96SB8 1091 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 DCTPP1Q9H773 170 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 VWA3AA6NCI4 1184 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 GTPBP4Q9BZE4 634 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 PLCH2O75038 1416 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 TUBB4AP04350 444 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 PSMC4P43686 418 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 IQUBQ8NA54 791 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 CTNND2Q9UQB3 1225 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 UBAP1LF5GYI3 381 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 MBD4O95243 580 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 FLT4P35916 1363 aa20.22■□□□□ 0.83
ARHGEF28-203ENST00000426542 C8orf34Q49A92 452 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 SYT10Q6XYQ8 523 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 JDP2Q8WYK2 163 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 LUC7L2Q9Y383 392 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 TXNDC16Q9P2K2 825 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 SV2BQ7L1I2 683 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 TIGD1Q96MW7 591 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 EYA3Q99504 573 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 CHMLP26374 656 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 LETM2Q2VYF4 491 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 RIMS2Q9UQ26 1411 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 MAK16Q9BXY0 300 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 ZKSCAN5Q9Y2L8 839 aa20.21■□□□□ 0.83
ARHGEF28-203ENST00000426542 KRT5P13647 590 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 TSGA10Q9BZW7 698 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 KCNK9Q9NPC2 374 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 TOM1O60784 492 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 CCDC65Q8IXS2 484 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 RBM17Q96I25 401 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 FRMD4BQ9Y2L6 1034 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 VAMP4O75379 141 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 CCDC121Q6ZUS5 278 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 VPS18Q9P253 973 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 GPCPD1Q9NPB8 672 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 UHRF1BP1LA0JNW5 1464 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 TLDC2A0PJX2 215 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 FAM169AQ9Y6X4 670 aa20.2■□□□□ 0.82
ARHGEF28-203ENST00000426542 MAP7D1Q3KQU3 841 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 DNAJC21Q5F1R6 531 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 RAD50Q92878 1312 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 CCT6AP40227 531 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 A0A1B0GVL5 298 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 RPL13P26373 211 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 NAP1L4Q99733 375 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 MTRF1LQ9UGC7 380 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 ELP1O95163 1332 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 CAPN2P17655 700 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 TAF12Q16514 161 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 SEL1L2Q5TEA6 688 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 DENND2AQ9ULE3 1009 aa20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 SOS1Q07889 1333 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF28-203ENST00000426542 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 RNMTO43148 476 aaKnown RBP20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 THOC2Q8NI27 1593 aaKnown RBP20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 EPB41P11171 864 aaKnown RBP20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 HARSP12081 509 aaKnown RBP20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 TNNC1P63316 161 aa20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 ZEB2O60315 1214 aa20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 CFAP58Q5T655 872 aa20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 MTUS1Q9ULD2 1270 aa20.18■□□□□ 0.82
ARHGEF28-203ENST00000426542 POLD1P28340 1107 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 TTC6Q86TZ1 520 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 ABCC1P33527 1531 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 CCDC160A6NGH7 325 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 TRAF5O00463 557 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 TEX11Q8IYF3 940 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 CHMP2AO43633 222 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 RLBP1P12271 317 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 CPA1P15085 419 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 UBLCP1Q8WVY7 318 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 NOC4LQ9BVI4 516 aaKnown RBP20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 B4E1Z4 1266 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 AKR1B15C9JRZ8 316 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 VAV2P52735 878 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 CCDC122Q5T0U0 273 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 CNGA4Q8IV77 575 aa20.17■□□□□ 0.82
ARHGEF28-203ENST00000426542 CPLX4Q7Z7G2 160 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 ANAPC4Q9UJX5 808 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 BIRC3Q13489 604 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 KIAA1524Q8TCG1 905 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 WDR44Q5JSH3 913 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 CCDC14Q49A88 953 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 FNBP1Q96RU3 617 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 ODF2LQ9ULJ1 636 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms