RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 STRN4Q9NRL3 753 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 BABAM1Q9NWV8 329 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CHMP5Q9NZZ3 219 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CEP126Q9P2H0 1117 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 WWC3Q9ULE0 1092 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 LMO7Q8WWI1 1683 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 SOS1Q07889 1333 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 SALL3Q9BXA9 1300 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 RGPD2P0DJD1 1756 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CEMIPQ8WUJ3 1361 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 TNS2Q63HR2 1409 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 ADAMTS7Q9UKP4 1686 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 GNAT3A8MTJ3 354 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 PLSCR1O15162 318 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 UPP2O95045 317 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 SDSP20132 328 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 MCM4P33991 863 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 GMPRP36959 345 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 SCTRP47872 440 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 CCT4P50991 539 aaKnown RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 MCCD1P59942 119 aaPredicted RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 ERVK-9P63128 1117 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 TXNRD1Q16881 649 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 HDGFL1Q5TGJ6 251 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 FOXD4L5Q5VV16 416 aaPredicted RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 NBPF6Q5VWK0 638 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 LARP1Q6PKG0 1096 aaKnown RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 GPR161Q8N6U8 529 aaKnown RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 USHBP1Q8N6Y0 703 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 ABTB2Q8N961 1025 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 RTF1Q92541 710 aaKnown RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 KLRG1Q96E93 195 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 LTV1Q96GA3 475 aaPredicted RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 NBPF4Q96M43 638 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 CCDC85AQ96PX6 553 aaPredicted RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 ARID3AQ99856 593 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 CDCA7Q9BWT1 371 aaPredicted RBP3.37□□□□□ -1.87
LINC00407-201ENST00000426509 OSBPL3Q9H4L5 887 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 ALG2Q9H553 416 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 BRPF3Q9ULD4 1205 aa3.37□□□□□ -1.87
LINC00407-201ENST00000426509 OVOS2A0A0G2JMS6 1433 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 NWD2Q9ULI1 1742 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 SIPA1L3O60292 1781 aaPredicted RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 PNMA6EA0A0J9YXQ4 647 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 FSD2A1L4K1 749 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 SLC35F4A4IF30 521 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 K7ELQ4 463 aaPredicted RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 KCNQ3O43525 872 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 HSPA1AP0DMV8 641 aaKnown RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 HSPA1BP0DMV9 641 aaKnown RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 VSIG8P0DPA2 414 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 PDE1AP54750 535 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 EIF4A1P60842 406 aaKnown RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 ATP8B2P98198 1209 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 PTSQ03393 145 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 SUZ12Q15022 739 aaKnown RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 RAB3GAP1Q15042 981 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 TAF7Q15545 349 aaPredicted RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 CCDC30Q5VVM6 783 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 ARHGEF25Q86VW2 580 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 RNF217Q8TC41 542 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 SLC16A10Q8TF71 515 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 CALR3Q96L12 384 aaKnown RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 USP26Q9BXU7 913 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 KIF1AQ12756 1690 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 ALS2Q96Q42 1657 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 IBTKQ9P2D0 1353 aaPredicted RBP3.36□□□□□ -1.87
LINC00407-201ENST00000426509 ABCA3Q99758 1704 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 CRYBG1Q9Y4K1 1723 aa3.36□□□□□ -1.87
LINC00407-201ENST00000426509 ABCC6O95255 1503 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 CACNA1FO60840 1977 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 HMMRO75330 724 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 GNAI2P04899 355 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 GNAI3P08754 354 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 HOXB7P09629 217 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 SSFA2P28290 1259 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 RNF144AP50876 292 aaPredicted RBP3.35□□□□□ -1.87
LINC00407-201ENST00000426509 ZC3H6P61129 1189 aaKnown RBP3.35□□□□□ -1.87
LINC00407-201ENST00000426509 SEMA3FQ13275 785 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 FKBP5Q13451 457 aaPredicted RBP3.35□□□□□ -1.87
LINC00407-201ENST00000426509 RABEP1Q15276 862 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.35□□□□□ -1.87
LINC00407-201ENST00000426509 TSHZ3Q63HK5 1081 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 CC2D2BQ6DHV5 1058 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 SLC4A10Q6U841 1118 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 MARCH10Q8NA82 808 aaPredicted RBP3.35□□□□□ -1.87
LINC00407-201ENST00000426509 TNPO1Q92973 898 aaKnown RBP3.35□□□□□ -1.87
LINC00407-201ENST00000426509 IRF7Q92985 503 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 STK31Q9BXU1 1019 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 USP44Q9H0E7 712 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 LGR6Q9HBX8 967 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 NMRK2Q9NPI5 230 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 PRDM11Q9NQV5 511 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 LRRC4BQ9NT99 713 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 STK32BQ9NY57 414 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 STAP2Q9UGK3 403 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 EXOC6BQ9Y2D4 811 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 LRRFIP2Q9Y608 721 aaKnown RBP3.35□□□□□ -1.87
LINC00407-201ENST00000426509 AOX1Q06278 1338 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 HEG1Q9ULI3 1381 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms