RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 CCDC57Q2TAC2 916 aa19.19■□□□□ 0.66
HDAC11-210ENST00000425430 LMBR1LQ6UX01 489 aa19.19■□□□□ 0.66
HDAC11-210ENST00000425430 ELP3Q9H9T3 547 aa19.19■□□□□ 0.66
HDAC11-210ENST00000425430 PTPN22Q9Y2R2 807 aa19.19■□□□□ 0.66
HDAC11-210ENST00000425430 UTYO14607 1347 aa19.19■□□□□ 0.66
HDAC11-210ENST00000425430 USP2O75604 605 aaPredicted RBP19.18■□□□□ 0.66
HDAC11-210ENST00000425430 TNFAIP1Q13829 316 aa19.18■□□□□ 0.66
HDAC11-210ENST00000425430 LDHAL6AQ6ZMR3 332 aa19.18■□□□□ 0.66
HDAC11-210ENST00000425430 OPTNQ96CV9 577 aa19.18■□□□□ 0.66
HDAC11-210ENST00000425430 EFCC1Q9HA90 598 aa19.18■□□□□ 0.66
HDAC11-210ENST00000425430 MFSD14BQ5SR56 506 aa19.17■□□□□ 0.66
HDAC11-210ENST00000425430 USP44Q9H0E7 712 aa19.17■□□□□ 0.66
HDAC11-210ENST00000425430 TTF2Q9UNY4 1162 aaKnown RBP19.17■□□□□ 0.66
HDAC11-210ENST00000425430 BRCA2P51587 3418 aa19.16■□□□□ 0.66
HDAC11-210ENST00000425430 SP3Q02447 781 aa19.16■□□□□ 0.66
HDAC11-210ENST00000425430 SPDYE2Q495Y8 402 aa19.16■□□□□ 0.66
HDAC11-210ENST00000425430 PTPN18Q99952 460 aa19.16■□□□□ 0.66
HDAC11-210ENST00000425430 TDRD3Q9H7E2 651 aaKnown RBP19.16■□□□□ 0.66
HDAC11-210ENST00000425430 ZNF70Q9UC06 446 aaPredicted RBP19.16■□□□□ 0.66
HDAC11-210ENST00000425430 TNNQ9UQP3 1299 aa19.16■□□□□ 0.66
HDAC11-210ENST00000425430 FAM205AQ6ZU69 1335 aa19.16■□□□□ 0.66
HDAC11-210ENST00000425430 KIAA0100Q14667 2235 aaKnown RBP19.15■□□□□ 0.66
HDAC11-210ENST00000425430 GYG1P46976 350 aa19.15■□□□□ 0.66
HDAC11-210ENST00000425430 CDAN1Q8IWY9 1227 aa19.15■□□□□ 0.66
HDAC11-210ENST00000425430 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
HDAC11-210ENST00000425430 TCP10L2B9ZVM9 353 aa19.14■□□□□ 0.65
HDAC11-210ENST00000425430 BCAR3O75815 825 aa19.14■□□□□ 0.65
HDAC11-210ENST00000425430 EN2P19622 333 aaPredicted RBP19.14■□□□□ 0.65
HDAC11-210ENST00000425430 CNKSR2Q8WXI2 1034 aa19.14■□□□□ 0.65
HDAC11-210ENST00000425430 ARMC5Q96C12 935 aa19.14■□□□□ 0.65
HDAC11-210ENST00000425430 BICC1Q9H694 974 aaKnown RBP19.14■□□□□ 0.65
HDAC11-210ENST00000425430 SERPINA10Q9UK55 444 aa19.14■□□□□ 0.65
HDAC11-210ENST00000425430 TESPA1A2RU30 521 aaPredicted RBP19.13■□□□□ 0.65
HDAC11-210ENST00000425430 HIBADHP31937 336 aaKnown RBP19.13■□□□□ 0.65
HDAC11-210ENST00000425430 CAP1Q01518 475 aa19.13■□□□□ 0.65
HDAC11-210ENST00000425430 TAF1CQ15572 869 aaPredicted RBP19.13■□□□□ 0.65
HDAC11-210ENST00000425430 HABP4Q5JVS0 413 aaKnown RBP19.13■□□□□ 0.65
HDAC11-210ENST00000425430 TDRD7Q8NHU6 1098 aaKnown RBP19.13■□□□□ 0.65
HDAC11-210ENST00000425430 TMEM39BQ9GZU3 492 aa19.13■□□□□ 0.65
HDAC11-210ENST00000425430 CCL15-CCL14A0A0B4J2E2 113 aa19.12■□□□□ 0.65
HDAC11-210ENST00000425430 CRKP46108 304 aa19.12■□□□□ 0.65
HDAC11-210ENST00000425430 VGLL4Q14135 290 aa19.12■□□□□ 0.65
HDAC11-210ENST00000425430 CCL15Q16663 113 aa19.12■□□□□ 0.65
HDAC11-210ENST00000425430 RABL6Q3YEC7 729 aaPredicted RBP19.12■□□□□ 0.65
HDAC11-210ENST00000425430 DZIP1LQ8IYY4 767 aaKnown RBP19.12■□□□□ 0.65
HDAC11-210ENST00000425430 BRI3BPQ8WY22 251 aa19.12■□□□□ 0.65
HDAC11-210ENST00000425430 PUS3Q9BZE2 481 aaKnown RBP19.12■□□□□ 0.65
HDAC11-210ENST00000425430 CSADQ9Y600 493 aa19.12■□□□□ 0.65
HDAC11-210ENST00000425430 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 TNNI2P48788 182 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 UBE4AQ14139 1066 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.11■□□□□ 0.65
HDAC11-210ENST00000425430 OTUD5Q96G74 571 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 MS4A4AQ96JQ5 239 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 TEPSINQ96N21 525 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 TMEM106CQ9BVX2 250 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 ZFYVE28Q9HCC9 887 aa19.11■□□□□ 0.65
HDAC11-210ENST00000425430 GTF2A2P52657 109 aa19.1■□□□□ 0.65
HDAC11-210ENST00000425430 CHAF1AQ13111 956 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-210ENST00000425430 SLC9C1Q4G0N8 1177 aa19.1■□□□□ 0.65
HDAC11-210ENST00000425430 VPS37DQ86XT2 251 aa19.1■□□□□ 0.65
HDAC11-210ENST00000425430 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-210ENST00000425430 IQSEC3Q9UPP2 1182 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-210ENST00000425430 PTCH2Q9Y6C5 1203 aa19.1■□□□□ 0.65
HDAC11-210ENST00000425430 ZSWIM8A7E2V4 1837 aa19.09■□□□□ 0.65
HDAC11-210ENST00000425430 MAP3K9P80192 1104 aa19.09■□□□□ 0.65
HDAC11-210ENST00000425430 ARHGEF6Q15052 776 aa19.09■□□□□ 0.65
HDAC11-210ENST00000425430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.09■□□□□ 0.654e-6■□□□□ 11.3
HDAC11-210ENST00000425430 KLHDC4Q8TBB5 520 aa19.09■□□□□ 0.65
HDAC11-210ENST00000425430 ZNF333Q96JL9 665 aa19.09■□□□□ 0.65
HDAC11-210ENST00000425430 API5Q9BZZ5 524 aaKnown RBP19.09■□□□□ 0.65
HDAC11-210ENST00000425430 FRAT2O75474 233 aaPredicted RBP19.08■□□□□ 0.64
HDAC11-210ENST00000425430 MYCP01106 439 aaPredicted RBP19.08■□□□□ 0.64
HDAC11-210ENST00000425430 CACNB3P54284 484 aa19.08■□□□□ 0.64
HDAC11-210ENST00000425430 FAM43AQ8N2R8 423 aa19.08■□□□□ 0.64
HDAC11-210ENST00000425430 KIF16BQ96L93 1317 aa19.07■□□□□ 0.64
HDAC11-210ENST00000425430 TRIM27P14373 513 aa19.07■□□□□ 0.64
HDAC11-210ENST00000425430 GRIK5Q16478 980 aa19.07■□□□□ 0.64
HDAC11-210ENST00000425430 SLC4A8Q2Y0W8 1093 aa19.07■□□□□ 0.64
HDAC11-210ENST00000425430 NBPF11Q86T75 865 aa19.07■□□□□ 0.64
HDAC11-210ENST00000425430 MEIS3Q99687 375 aa19.07■□□□□ 0.64
HDAC11-210ENST00000425430 MROH5Q6ZUA9 1318 aa19.06■□□□□ 0.64
HDAC11-210ENST00000425430 WDHD1O75717 1129 aaPredicted RBP19.06■□□□□ 0.64
HDAC11-210ENST00000425430 LRRC24Q50LG9 513 aa19.06■□□□□ 0.64
HDAC11-210ENST00000425430 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
HDAC11-210ENST00000425430 FRAT1Q92837 279 aaPredicted RBP19.06■□□□□ 0.64
HDAC11-210ENST00000425430 WRNIP1Q96S55 665 aa19.06■□□□□ 0.64
HDAC11-210ENST00000425430 TMOD2Q9NZR1 351 aa19.06■□□□□ 0.64
HDAC11-210ENST00000425430 RIPOR2Q9Y4F9 1068 aa19.06■□□□□ 0.64
HDAC11-210ENST00000425430 SPDYE5A6NIY4 337 aa19.05■□□□□ 0.64
HDAC11-210ENST00000425430 RFX5P48382 616 aaPredicted RBP19.05■□□□□ 0.64
HDAC11-210ENST00000425430 METTL24Q5JXM2 366 aa19.05■□□□□ 0.64
HDAC11-210ENST00000425430 TEKT1Q969V4 418 aa19.05■□□□□ 0.64
HDAC11-210ENST00000425430 SNCAIPQ9Y6H5 919 aa19.05■□□□□ 0.64
HDAC11-210ENST00000425430 ECM2O94769 699 aaPredicted RBP19.04■□□□□ 0.64
HDAC11-210ENST00000425430 CETPP11597 493 aa19.04■□□□□ 0.64
HDAC11-210ENST00000425430 KIF22Q14807 665 aa19.04■□□□□ 0.64
HDAC11-210ENST00000425430 CAVIN4Q5BKX8 364 aa19.04■□□□□ 0.64
HDAC11-210ENST00000425430 SH3TC2Q8TF17 1288 aa19.04■□□□□ 0.64
HDAC11-210ENST00000425430 TBC1D22AQ8WUA7 517 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms