RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 MYH13Q9UKX3 1938 aa12.39□□□□□ -0.43
MDC1-205ENST00000425072 LTBP3Q9NS15 1303 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 LTBP1Q14766 1721 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 A0A0D9SFI3 127 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 ECE2O60344 883 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 BAG3O95817 575 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 CYP7A1P22680 504 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 MMP14P50281 582 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 AOC3Q16853 763 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 MFSD14BQ5SR56 506 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 RNF20Q5VTR2 975 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 DZIP1Q86YF9 867 aaKnown RBP12.38□□□□□ -0.43
MDC1-205ENST00000425072 NIM1KQ8IY84 436 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 NLGN2Q8NFZ4 835 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 MAP4K1Q92918 833 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 AIDAQ96BJ3 306 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 NSUN4Q96CB9 384 aaKnown RBP12.38□□□□□ -0.43
MDC1-205ENST00000425072 FAM163AQ96GL9 167 aaPredicted RBP12.38□□□□□ -0.43
MDC1-205ENST00000425072 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 DBNDD1Q9H9R9 158 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 CTNNA3Q9UI47 895 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 ZNRF3Q9ULT6 936 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
MDC1-205ENST00000425072 MYH7P12883 1935 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
MDC1-205ENST00000425072 MAST3O60307 1309 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 TCRBV5S4A2TA0A5A2 114 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
MDC1-205ENST00000425072 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
MDC1-205ENST00000425072 MECOMQ03112 1051 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 SLC51AQ86UW1 340 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 FBXW7Q969H0 707 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 TBC1D32Q96NH3 1257 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 DSCC1Q9BVC3 393 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 ZNF277Q9NRM2 450 aaPredicted RBP12.37□□□□□ -0.43
MDC1-205ENST00000425072 WWC3Q9ULE0 1092 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
MDC1-205ENST00000425072 RPAP1Q9BWH6 1393 aaPredicted RBP12.36□□□□□ -0.43
MDC1-205ENST00000425072 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
MDC1-205ENST00000425072 ANAPC15P60006 121 aa12.36□□□□□ -0.43
MDC1-205ENST00000425072 HDLBPQ00341 1268 aaKnown RBP12.36□□□□□ -0.43
MDC1-205ENST00000425072 TNIP1Q15025 636 aa12.36□□□□□ -0.43
MDC1-205ENST00000425072 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
MDC1-205ENST00000425072 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
MDC1-205ENST00000425072 NACAP1Q9BZK3 213 aa12.36□□□□□ -0.43
MDC1-205ENST00000425072 LSG1Q9H089 658 aaKnown RBP12.36□□□□□ -0.43
MDC1-205ENST00000425072 PUS7LQ9H0K6 701 aaKnown RBP12.36□□□□□ -0.43
MDC1-205ENST00000425072 BRCA1P38398 1863 aaKnown RBP12.36□□□□□ -0.43
MDC1-205ENST00000425072 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
MDC1-205ENST00000425072 KIAA1551Q9HCM1 1747 aa12.35□□□□□ -0.43
MDC1-205ENST00000425072 GPAA1O43292 621 aa12.35□□□□□ -0.43
MDC1-205ENST00000425072 APPP05067 770 aa12.35□□□□□ -0.43
MDC1-205ENST00000425072 HSPD1P10809 573 aaKnown RBP12.35□□□□□ -0.43
MDC1-205ENST00000425072 PLCG2P16885 1265 aa12.35□□□□□ -0.43
MDC1-205ENST00000425072 ZKSCAN1P17029 563 aaPredicted RBP12.35□□□□□ -0.43
MDC1-205ENST00000425072 PPP4CP60510 307 aa12.35□□□□□ -0.43
MDC1-205ENST00000425072 MYO5AQ9Y4I1 1855 aaKnown RBP12.35□□□□□ -0.43
MDC1-205ENST00000425072 SNED1Q8TER0 1413 aa12.35□□□□□ -0.43
MDC1-205ENST00000425072 CAPN15O75808 1086 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 VIL1P09327 827 aaKnown RBP12.34□□□□□ -0.43
MDC1-205ENST00000425072 PRDX5P30044 214 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 HSPA4P34932 840 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 ANP32AP39687 249 aaKnown RBP12.34□□□□□ -0.43
MDC1-205ENST00000425072 PTH1RQ03431 593 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 NECTIN1Q15223 517 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 ALX1Q15699 326 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 DACT2Q5SW24 774 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 TTF2Q9UNY4 1162 aaKnown RBP12.34□□□□□ -0.43
MDC1-205ENST00000425072 JAG2Q9Y219 1238 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
MDC1-205ENST00000425072 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 GPR75-ASB3A0A0A6YYF3 556 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 M0R2C6 588 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 NFKBIEO00221 500 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 MBD4O95243 580 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 EIF6P56537 245 aaKnown RBP12.33□□□□□ -0.44
MDC1-205ENST00000425072 KRT32Q14532 448 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 GIMAP6Q6P9H5 292 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 ZNF589Q86UQ0 364 aaPredicted RBP12.33□□□□□ -0.44
MDC1-205ENST00000425072 OGFOD1Q8N543 542 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 CRNKL1Q9BZJ0 848 aaKnown RBP12.33□□□□□ -0.44
MDC1-205ENST00000425072 RBM8AQ9Y5S9 174 aaKnown RBP12.33□□□□□ -0.44
MDC1-205ENST00000425072 SLC4A4Q9Y6R1 1079 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
MDC1-205ENST00000425072 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
MDC1-205ENST00000425072 CHGBP05060 677 aa12.32□□□□□ -0.44
MDC1-205ENST00000425072 LMNB1P20700 586 aa12.32□□□□□ -0.44
MDC1-205ENST00000425072 PSMA5P28066 241 aa12.32□□□□□ -0.44
MDC1-205ENST00000425072 IMMTQ16891 758 aaKnown RBP12.32□□□□□ -0.44
MDC1-205ENST00000425072 TSGA10IPQ3SY00 556 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms