RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 USP17L7P0C7H9 530 aa6.66□□□□□ -1.34
HDAC9-209ENST00000425071 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.66□□□□□ -1.34
HDAC9-209ENST00000425071 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
HDAC9-209ENST00000425071 WFDC12Q8WWY7 111 aa6.66□□□□□ -1.34
HDAC9-209ENST00000425071 CEP41Q9BYV8 373 aa6.66□□□□□ -1.34
HDAC9-209ENST00000425071 RNF208Q9H0X6 261 aa6.66□□□□□ -1.34
HDAC9-209ENST00000425071 KCNK4Q9NYG8 393 aa6.66□□□□□ -1.34
HDAC9-209ENST00000425071 RBM47A0AV96 593 aaKnown RBP6.65□□□□□ -1.34
HDAC9-209ENST00000425071 ADAM11O75078 769 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 NLRP12P59046 1061 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 POU4F3Q15319 338 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 EXOSC6Q5RKV6 272 aaKnown RBP6.65□□□□□ -1.34
HDAC9-209ENST00000425071 SCARA3Q6AZY7 606 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 Q6ZS46 218 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 ACAD11Q709F0 780 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 SV2BQ7L1I2 683 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-209ENST00000425071 CORO1BQ9BR76 489 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 EMILIN2Q9BXX0 1053 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 NRSN2Q9GZP1 204 aa6.65□□□□□ -1.34
HDAC9-209ENST00000425071 GPN3Q9UHW5 284 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-209ENST00000425071 SYNGAP1Q96PV0 1343 aa6.65□□□□□ -1.35
HDAC9-209ENST00000425071 ITGB2P05107 769 aa6.64□□□□□ -1.35
HDAC9-209ENST00000425071 ST13P50502 369 aaKnown RBP6.64□□□□□ -1.35
HDAC9-209ENST00000425071 FAAP100Q0VG06 881 aa6.64□□□□□ -1.35
HDAC9-209ENST00000425071 HGSNATQ68CP4 663 aa6.64□□□□□ -1.35
HDAC9-209ENST00000425071 ANKRD34AQ69YU3 496 aa6.64□□□□□ -1.35
HDAC9-209ENST00000425071 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
HDAC9-209ENST00000425071 NECAB3Q96P71 396 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-209ENST00000425071 SUGCTQ9HAC7 445 aa6.64□□□□□ -1.35
HDAC9-209ENST00000425071 LOC100289279A0A1B0GTE1 492 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 DDX3YO15523 660 aaKnown RBP6.63□□□□□ -1.35
HDAC9-209ENST00000425071 RLBP1P12271 317 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 ZNF16P17020 682 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-209ENST00000425071 NME2P22392 152 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 IREB2P48200 963 aaKnown RBP6.63□□□□□ -1.35
HDAC9-209ENST00000425071 TAF1CQ15572 869 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-209ENST00000425071 UVSSAQ2YD98 709 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 GPAT2Q6NUI2 795 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 DZIP1LQ8IYY4 767 aaKnown RBP6.63□□□□□ -1.35
HDAC9-209ENST00000425071 CRELD1Q96HD1 420 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 SPOCK3Q9BQ16 436 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 RUSC1Q9BVN2 902 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 USP26Q9BXU7 913 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 CYP4F12Q9HCS2 524 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 KRT82Q9NSB4 513 aa6.63□□□□□ -1.35
HDAC9-209ENST00000425071 USP31Q70CQ4 1352 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 PROCP04070 461 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 MAOBP27338 520 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 NOS3P29474 1203 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 NUTM2GQ5VZR2 741 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 SMG8Q8ND04 991 aaKnown RBP6.62□□□□□ -1.35
HDAC9-209ENST00000425071 RGS22Q8NE09 1264 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 UBASH3BQ8TF42 649 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 TRIM56Q9BRZ2 755 aaKnown RBP6.62□□□□□ -1.35
HDAC9-209ENST00000425071 NOC4LQ9BVI4 516 aaKnown RBP6.62□□□□□ -1.35
HDAC9-209ENST00000425071 TMPRSS13Q9BYE2 586 aa6.62□□□□□ -1.35
HDAC9-209ENST00000425071 TTF2Q9UNY4 1162 aaKnown RBP6.62□□□□□ -1.35
HDAC9-209ENST00000425071 WISP1O95388 367 aa6.61□□□□□ -1.35
HDAC9-209ENST00000425071 ARNTP27540 789 aa6.61□□□□□ -1.35
HDAC9-209ENST00000425071 TAGLNQ01995 201 aaKnown RBP6.61□□□□□ -1.35
HDAC9-209ENST00000425071 LRRC14Q15048 493 aa6.61□□□□□ -1.35
HDAC9-209ENST00000425071 FDX2Q6P4F2 183 aa6.61□□□□□ -1.35
HDAC9-209ENST00000425071 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
HDAC9-209ENST00000425071 SSBP4Q9BWG4 385 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-209ENST00000425071 VTI1BQ9UEU0 232 aa6.61□□□□□ -1.35
HDAC9-209ENST00000425071 CYP8B1Q9UNU6 501 aa6.61□□□□□ -1.35
HDAC9-209ENST00000425071 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
HDAC9-209ENST00000425071 ENC1O14682 589 aa6.6□□□□□ -1.35
HDAC9-209ENST00000425071 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
HDAC9-209ENST00000425071 GLB1P16278 677 aa6.6□□□□□ -1.35
HDAC9-209ENST00000425071 ZNF157P51786 506 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-209ENST00000425071 MRPL58Q14197 206 aaKnown RBP6.6□□□□□ -1.35
HDAC9-209ENST00000425071 SULF2Q8IWU5 870 aa6.6□□□□□ -1.35
HDAC9-209ENST00000425071 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
HDAC9-209ENST00000425071 RNF19AQ9NV58 838 aa6.6□□□□□ -1.35
HDAC9-209ENST00000425071 SART1O43290 800 aaKnown RBP6.59□□□□□ -1.35
HDAC9-209ENST00000425071 ALX3O95076 343 aa6.59□□□□□ -1.35
HDAC9-209ENST00000425071 SLFN14P0C7P3 912 aa6.59□□□□□ -1.35
HDAC9-209ENST00000425071 VAMP1P23763 118 aa6.59□□□□□ -1.35
HDAC9-209ENST00000425071 RPS26P62854 115 aaKnown RBP6.59□□□□□ -1.35
HDAC9-209ENST00000425071 AGGF1Q8N302 714 aaeCLIP6.59□□□□□ -1.35
HDAC9-209ENST00000425071 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
HDAC9-209ENST00000425071 HIF3AQ9Y2N7 669 aa6.59□□□□□ -1.35
HDAC9-209ENST00000425071 CTSHP09668 335 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 H2AFB1P0C5Y9 115 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 H2AFB2P0C5Z0 115 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 ZNF252P-AS1Q0IIN9 211 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 CCDC85BQ15834 202 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-209ENST00000425071 PDZD3Q86UT5 571 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 FAM46AQ96IP4 442 aaKnown RBP6.58□□□□□ -1.36
HDAC9-209ENST00000425071 MEGF10Q96KG7 1140 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 RAD18Q9NS91 495 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 PODXL2Q9NZ53 605 aa6.58□□□□□ -1.36
HDAC9-209ENST00000425071 TRIM37O94972 964 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 TIAF1O95411 115 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 DLGAP3O95886 979 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 BMP6P22004 513 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 SOX4Q06945 474 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-209ENST00000425071 PWP1Q13610 501 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms