RNA–Protein interactions for RNA: ENST00000424415.1

FAM239B-202, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 2,194 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-202ENST00000424415 DYNC1I1O14576 645 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 PDE6AP16499 860 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 SYNE3Q6ZMZ3 975 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 CKAP2LQ8IYA6 745 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 USP28Q96RU2 1077 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 CCDC87Q9NVE4 849 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
FAM239B-202ENST00000424415 ZNF652Q9Y2D9 606 aa12.19□□□□□ -0.46
FAM239B-202ENST00000424415 ARAP2Q8WZ64 1704 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 MYH15Q9Y2K3 1946 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 NEMFO60524 1076 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 IDH1O75874 414 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 SF3A1Q15459 793 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 ZRSR1Q15695 479 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 WASF1Q92558 559 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 CCDC85AQ96PX6 553 aaPredicted RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 NACAP1Q9BZK3 213 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 PATL2C9JE40 543 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 FDPSP14324 419 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 RCAN1P53805 252 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 HAND2P61296 217 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 DNTTIP2Q5QJE6 756 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 SGMS1Q86VZ5 419 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 SPATA5Q8NB90 893 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 SMARCC1Q92922 1105 aaPredicted RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 SYTL4Q96C24 671 aaPredicted RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 CDC5LQ99459 802 aaKnown RBP12.18□□□□□ -0.46
FAM239B-202ENST00000424415 KRT23Q9C075 422 aa12.18□□□□□ -0.46
FAM239B-202ENST00000424415 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
FAM239B-202ENST00000424415 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 SH2B2O14492 632 aaPredicted RBP12.17□□□□□ -0.46
FAM239B-202ENST00000424415 APPP05067 770 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 IGHMBP2P38935 993 aaKnown RBP12.17□□□□□ -0.46
FAM239B-202ENST00000424415 LIFRP42702 1097 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.46
FAM239B-202ENST00000424415 CHAF1AQ13111 956 aaPredicted RBP12.17□□□□□ -0.46
FAM239B-202ENST00000424415 STK38Q15208 465 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 CHST3Q7LGC8 479 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 CEP57L1Q8IYX8 460 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 ENGASEQ8NFI3 743 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 TRIM5Q9C035 493 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 HPS5Q9UPZ3 1129 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 STK36Q9NRP7 1315 aa12.17□□□□□ -0.46
FAM239B-202ENST00000424415 TCRBV5S4A2TA0A5A2 114 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 ANTXR2P58335 489 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 SNW1Q13573 536 aaKnown RBP12.16□□□□□ -0.46
FAM239B-202ENST00000424415 TRIM29Q14134 588 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
FAM239B-202ENST00000424415 LUZP1Q86V48 1076 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 TMTC2Q8N394 836 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 STRBPQ96SI9 672 aaKnown RBP12.16□□□□□ -0.46
FAM239B-202ENST00000424415 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
FAM239B-202ENST00000424415 NUP98P52948 1817 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 AKAP11Q9UKA4 1901 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 NID2Q14112 1375 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 DTNBO60941 627 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 ZNF75DP51815 510 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 HSP90AA2PQ14568 343 aaPredicted RBP12.16□□□□□ -0.46
FAM239B-202ENST00000424415 DDB1Q16531 1140 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 MYSM1Q5VVJ2 828 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 MRFAP1L1Q96HT8 127 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 NAPBQ9H115 298 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
FAM239B-202ENST00000424415 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 RREB1Q92766 1687 aa12.16□□□□□ -0.46
FAM239B-202ENST00000424415 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
FAM239B-202ENST00000424415 BECN2A8MW95 431 aa12.15□□□□□ -0.46
FAM239B-202ENST00000424415 SPTLC2O15270 562 aa12.15□□□□□ -0.46
FAM239B-202ENST00000424415 PHKA1P46020 1223 aa12.15□□□□□ -0.46
FAM239B-202ENST00000424415 TPM4P67936 248 aa12.15□□□□□ -0.46
FAM239B-202ENST00000424415 CEBPZQ03701 1054 aaKnown RBP12.15□□□□□ -0.46
FAM239B-202ENST00000424415 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.46
FAM239B-202ENST00000424415 DRC7Q8IY82 874 aa12.15□□□□□ -0.46
FAM239B-202ENST00000424415 FMR1NBQ8N0W7 255 aaPredicted RBP12.15□□□□□ -0.46
FAM239B-202ENST00000424415 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.46
FAM239B-202ENST00000424415 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
FAM239B-202ENST00000424415 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
FAM239B-202ENST00000424415 SPATA31A1Q5TZJ5 1347 aa12.15□□□□□ -0.46
FAM239B-202ENST00000424415 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 A0A0G2JLW4 131 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 ZBTB43O43298 467 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 UQCRHP07919 91 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 PPP2R5BQ15173 497 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 CLEC4GQ6UXB4 293 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 PI16Q6UXB8 463 aa12.15□□□□□ -0.47
FAM239B-202ENST00000424415 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms