RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 DDX3YO15523 660 aaKnown RBP2.99□□□□□ -1.93
PMS1-210ENST00000424307 PROSER2Q86WR7 435 aaPredicted RBP2.99□□□□□ -1.93
PMS1-210ENST00000424307 NCAPG2Q86XI2 1143 aa2.99□□□□□ -1.93
PMS1-210ENST00000424307 ABTB2Q8N961 1025 aa2.99□□□□□ -1.93
PMS1-210ENST00000424307 POP1Q99575 1024 aaKnown RBP2.99□□□□□ -1.93
PMS1-210ENST00000424307 GSX1Q9H4S2 264 aaPredicted RBP2.99□□□□□ -1.93
PMS1-210ENST00000424307 ZCCHC4Q9H5U6 513 aa2.99□□□□□ -1.93
PMS1-210ENST00000424307 SH2B1Q9NRF2 756 aaPredicted RBP2.99□□□□□ -1.93
PMS1-210ENST00000424307 TFIP11Q9UBB9 837 aaKnown RBP2.99□□□□□ -1.93
PMS1-210ENST00000424307 PTK7Q13308 1070 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 IFI16Q16666 785 aaKnown RBP2.98□□□□□ -1.93
PMS1-210ENST00000424307 SPATS1Q496A3 300 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 ANGEL2Q5VTE6 544 aaKnown RBP2.98□□□□□ -1.93
PMS1-210ENST00000424307 BSNDQ8WZ55 320 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 MBNL3Q9NUK0 354 aaKnown RBP2.98□□□□□ -1.93
PMS1-210ENST00000424307 SALL4Q9UJQ4 1053 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 MAFBQ9Y5Q3 323 aaPredicted RBP2.98□□□□□ -1.93
PMS1-210ENST00000424307 AKAP8O43823 692 aaKnown RBP2.98□□□□□ -1.93
PMS1-210ENST00000424307 CELA3BP08861 270 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 PCSK2P16519 638 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 ADMP35318 185 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 DPYDQ12882 1025 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 COL13A1Q5TAT6 717 aaPredicted RBP2.98□□□□□ -1.93
PMS1-210ENST00000424307 FBLIM1Q8WUP2 373 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 RTEL1Q9NZ71 1219 aa2.98□□□□□ -1.93
PMS1-210ENST00000424307 LOC100289279A0A1B0GTE1 492 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 FAM170BA6NMN3 283 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 RNASE1P07998 156 aaKnown RBP2.97□□□□□ -1.93
PMS1-210ENST00000424307 C1QTNF9P0C862 333 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 NLRP12P59046 1061 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 FLIIQ13045 1269 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 IKBKEQ14164 716 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 KCNMB1Q16558 191 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 KANK4Q5T7N3 995 aaPredicted RBP2.97□□□□□ -1.93
PMS1-210ENST00000424307 CDPF1Q6NVV7 123 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 TXNDC11Q6PKC3 985 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 LRRC4CQ9HCJ2 640 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.97□□□□□ -1.93
PMS1-210ENST00000424307 NPIPB6E9PJ23 425 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 TMEM253P0C7T8 217 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 SRFP11831 508 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 SKOR2Q2VWA4 1001 aaPredicted RBP2.97□□□□□ -1.93
PMS1-210ENST00000424307 CDCA8Q53HL2 280 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 C16orf46Q6P387 395 aa2.97□□□□□ -1.93
PMS1-210ENST00000424307 FBXO15Q8NCQ5 510 aaPredicted RBP2.97□□□□□ -1.93
PMS1-210ENST00000424307 ZNF777Q9ULD5 760 aaPredicted RBP2.97□□□□□ -1.93
PMS1-210ENST00000424307 CNTNAP4Q9C0A0 1308 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 A6NJR5 290 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 KRT1P04264 644 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 ADH5P11766 374 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 SWI5Q1ZZU3 235 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 COX20Q5RI15 118 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 CFAP70Q5T0N1 1121 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 SEZ6L2Q6UXD5 910 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 WFDC3Q8IUB2 231 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 LRRN4CLQ8ND94 238 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 HRASLS5Q96KN8 279 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 USP26Q9BXU7 913 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 PPP1R12CQ9BZL4 782 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 VRTNQ9H8Y1 702 aa2.96□□□□□ -1.94
PMS1-210ENST00000424307 USP17L15C9J2P7 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L10C9JJH3 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L13C9JLJ4 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L12C9JPN9 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L11C9JVI0 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L21D6R901 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L18D6R9N7 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L22D6RA61 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L17D6RBQ6 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L19D6RCP7 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L20D6RJB6 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 SOX1O00570 391 aaPredicted RBP2.95□□□□□ -1.94
PMS1-210ENST00000424307 CYP11A1P05108 521 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 USP17L24Q0WX57 530 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 TRIP4Q15650 581 aaPredicted RBP2.95□□□□□ -1.94
PMS1-210ENST00000424307 CAPN12Q6ZSI9 719 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 SPRED2Q7Z698 418 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 ARXQ96QS3 562 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 MENTQ9BUN1 341 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 DZANK1Q9NVP4 752 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 LRFN2Q9ULH4 789 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 A0A0G2JLL6 359 aaPredicted RBP2.95□□□□□ -1.94
PMS1-210ENST00000424307 NFKBIEO00221 500 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 GLI1P08151 1106 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 KCNA10Q16322 511 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 FAM200AQ8TCP9 573 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 NXPE3Q969Y0 559 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 BHLHE41Q9C0J9 482 aaPredicted RBP2.95□□□□□ -1.94
PMS1-210ENST00000424307 ELP3Q9H9T3 547 aa2.95□□□□□ -1.94
PMS1-210ENST00000424307 MED14OSP0DP75 135 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 CD8BP10966 210 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 EDN3P14138 238 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 RFX1P22670 979 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 LMOD1P29536 600 aaPredicted RBP2.94□□□□□ -1.94
PMS1-210ENST00000424307 FAM26DQ5JW98 314 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 CALR3Q96L12 384 aaKnown RBP2.94□□□□□ -1.94
PMS1-210ENST00000424307 TCAF2A6NFQ2 919 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 ARID3CA6NKF2 412 aa2.94□□□□□ -1.94
PMS1-210ENST00000424307 CDC25BP30305 580 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms