RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 PCDHAC2Q9Y5I4 1007 aa23.68■■□□□ 1.38
GCDH-202ENST00000421816 PASKQ96RG2 1323 aa23.67■■□□□ 1.38
GCDH-202ENST00000421816 PITPNM2Q9BZ72 1349 aa23.67■■□□□ 1.38
GCDH-202ENST00000421816 SPDYE2BA6NHP3 402 aa23.67■■□□□ 1.38
GCDH-202ENST00000421816 IGHDP01880 384 aa23.67■■□□□ 1.38
GCDH-202ENST00000421816 LDHBP07195 334 aaKnown RBP23.67■■□□□ 1.38
GCDH-202ENST00000421816 SPDYE6P0CI01 402 aa23.67■■□□□ 1.38
GCDH-202ENST00000421816 CRKP46108 304 aa23.67■■□□□ 1.38
GCDH-202ENST00000421816 GGA3Q9NZ52 723 aa23.67■■□□□ 1.38
GCDH-202ENST00000421816 ANGEL2Q5VTE6 544 aaKnown RBP23.66■■□□□ 1.38
GCDH-202ENST00000421816 SPTY2D1Q68D10 685 aaPredicted RBP23.66■■□□□ 1.38
GCDH-202ENST00000421816 DCPSQ96C86 337 aaKnown RBP23.66■■□□□ 1.38
GCDH-202ENST00000421816 PRMT6Q96LA8 375 aaPredicted RBP23.66■■□□□ 1.38
GCDH-202ENST00000421816 SNRKQ9NRH2 765 aa23.66■■□□□ 1.38
GCDH-202ENST00000421816 CENPBP07199 599 aaPredicted RBP23.65■■□□□ 1.38
GCDH-202ENST00000421816 HHIPL2Q6UWX4 724 aa23.65■■□□□ 1.38
GCDH-202ENST00000421816 CDC37L1Q7L3B6 337 aa23.65■■□□□ 1.38
GCDH-202ENST00000421816 SMC5Q8IY18 1101 aa23.65■■□□□ 1.38
GCDH-202ENST00000421816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.65■■□□□ 1.38
GCDH-202ENST00000421816 TEKT1Q969V4 418 aa23.65■■□□□ 1.38
GCDH-202ENST00000421816 GLIS2Q9BZE0 524 aaPredicted RBP23.65■■□□□ 1.38
GCDH-202ENST00000421816 BCL11AQ9H165 835 aa23.65■■□□□ 1.38
GCDH-202ENST00000421816 ABCF2Q9UG63 623 aa23.65■■□□□ 1.38
GCDH-202ENST00000421816 CYP2E1P05181 493 aaPredicted RBP23.64■■□□□ 1.37
GCDH-202ENST00000421816 ZAP70P43403 619 aa23.64■■□□□ 1.37
GCDH-202ENST00000421816 RBM5P52756 815 aaKnown RBP eCLIP23.64■■□□□ 1.37
GCDH-202ENST00000421816 TBC1D9Q6ZT07 1266 aa23.64■■□□□ 1.37
GCDH-202ENST00000421816 ZDHHC15Q96MV8 337 aa23.64■■□□□ 1.37
GCDH-202ENST00000421816 MYO5AQ9Y4I1 1855 aaKnown RBP23.64■■□□□ 1.37
GCDH-202ENST00000421816 AOX1Q06278 1338 aa23.63■■□□□ 1.37
GCDH-202ENST00000421816 MYH2Q9UKX2 1941 aa23.63■■□□□ 1.37
GCDH-202ENST00000421816 ERICH6Q7L0X2 663 aa23.63■■□□□ 1.37
GCDH-202ENST00000421816 TRPM7Q96QT4 1865 aa23.63■■□□□ 1.37
GCDH-202ENST00000421816 DOCK2Q92608 1830 aa23.63■■□□□ 1.37
GCDH-202ENST00000421816 MAST2Q6P0Q8 1798 aa23.63■■□□□ 1.37
GCDH-202ENST00000421816 HSPA6P17066 643 aa23.62■■□□□ 1.37
GCDH-202ENST00000421816 ATP5JP18859 108 aa23.62■■□□□ 1.37
GCDH-202ENST00000421816 KRT26Q7Z3Y9 468 aa23.62■■□□□ 1.37
GCDH-202ENST00000421816 USP48Q86UV5 1035 aa23.62■■□□□ 1.37
GCDH-202ENST00000421816 TRAF5O00463 557 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 MYO1BO43795 1136 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 IGSF3O75054 1194 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 DIXDC1Q155Q3 683 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 ANKRD45Q5TZF3 282 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 APOBEC3HQ6NTF7 200 aaKnown RBP23.61■■□□□ 1.37
GCDH-202ENST00000421816 SULF1Q8IWU6 871 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 ZNF384Q8TF68 577 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 DAGLAQ9Y4D2 1042 aa23.61■■□□□ 1.37
GCDH-202ENST00000421816 ADM5C9JUS6 153 aa23.6■■□□□ 1.37
GCDH-202ENST00000421816 APLP1P51693 650 aa23.6■■□□□ 1.37
GCDH-202ENST00000421816 MECOMQ03112 1051 aa23.6■■□□□ 1.37
GCDH-202ENST00000421816 FMR1Q06787 632 aaKnown RBP eCLIP23.6■■□□□ 1.37
GCDH-202ENST00000421816 SPDYE2Q495Y8 402 aa23.6■■□□□ 1.37
GCDH-202ENST00000421816 DZIP1Q86YF9 867 aaKnown RBP23.6■■□□□ 1.37
GCDH-202ENST00000421816 FAM163AQ96GL9 167 aaPredicted RBP23.6■■□□□ 1.37
GCDH-202ENST00000421816 PIH1D3Q9NQM4 214 aaKnown RBP23.6■■□□□ 1.37
GCDH-202ENST00000421816 NDUFB9Q9Y6M9 179 aa23.6■■□□□ 1.37
GCDH-202ENST00000421816 GAKO14976 1311 aa23.59■■□□□ 1.37
GCDH-202ENST00000421816 APOBEC3FQ8IUX4 373 aaKnown RBP23.59■■□□□ 1.37
GCDH-202ENST00000421816 NSUN4Q96CB9 384 aaKnown RBP23.59■■□□□ 1.37
GCDH-202ENST00000421816 TDRD3Q9H7E2 651 aaKnown RBP23.59■■□□□ 1.37
GCDH-202ENST00000421816 ECHDC1Q9NTX5 307 aa23.59■■□□□ 1.37
GCDH-202ENST00000421816 LRP2BPQ9P2M1 347 aa23.59■■□□□ 1.37
GCDH-202ENST00000421816 ZNF70Q9UC06 446 aaPredicted RBP23.59■■□□□ 1.37
GCDH-202ENST00000421816 CLRN2A0PK11 232 aa23.58■■□□□ 1.37
GCDH-202ENST00000421816 DLK2Q6UY11 383 aa23.58■■□□□ 1.37
GCDH-202ENST00000421816 SLF2Q8IX21 1173 aa23.58■■□□□ 1.37
GCDH-202ENST00000421816 ANTXR1Q9H6X2 564 aa23.58■■□□□ 1.37
GCDH-202ENST00000421816 RAI14Q9P0K7 980 aa23.58■■□□□ 1.37
GCDH-202ENST00000421816 SALL3Q9BXA9 1300 aa23.58■■□□□ 1.36
GCDH-202ENST00000421816 HAUS7Q99871 368 aa23.57■■□□□ 1.36
GCDH-202ENST00000421816 BOLA2Q9H3K6 86 aa23.57■■□□□ 1.36
GCDH-202ENST00000421816 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
GCDH-202ENST00000421816 SCAF8Q9UPN6 1271 aaKnown RBP23.57■■□□□ 1.36
GCDH-202ENST00000421816 MROH7-TTC4A0A0A0MT08 1334 aa23.57■■□□□ 1.36
GCDH-202ENST00000421816 GSTO1P78417 241 aa23.56■■□□□ 1.36
GCDH-202ENST00000421816 OTUD7AQ8TE49 926 aaPredicted RBP23.56■■□□□ 1.36
GCDH-202ENST00000421816 GPATCH3Q96I76 525 aa23.56■■□□□ 1.36
GCDH-202ENST00000421816 TTC41PQ6P2S7 1318 aa23.56■■□□□ 1.36
GCDH-202ENST00000421816 LDHCP07864 332 aa23.55■■□□□ 1.36
GCDH-202ENST00000421816 NUCB1Q02818 461 aa23.55■■□□□ 1.36
GCDH-202ENST00000421816 TTF1Q15361 905 aaPredicted RBP23.55■■□□□ 1.36
GCDH-202ENST00000421816 CST9Q5W186 159 aa23.55■■□□□ 1.36
GCDH-202ENST00000421816 CDCA5Q96FF9 252 aa23.55■■□□□ 1.36
GCDH-202ENST00000421816 DNAJC2Q99543 621 aaKnown RBP23.55■■□□□ 1.36
GCDH-202ENST00000421816 VEZTQ9HBM0 779 aa23.55■■□□□ 1.36
GCDH-202ENST00000421816 B4GALNT3Q6L9W6 998 aa23.54■■□□□ 1.36
GCDH-202ENST00000421816 GPR75-ASB3A0A0A6YYF3 556 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 TMEM88BA6NKF7 163 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 GOLIM4O00461 696 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 MX1P20591 662 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 FKBP1CQ5VVH2 108 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 CDC42EP5Q6NZY7 148 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 CHD1LQ86WJ1 897 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 DEFB129Q9H1M3 183 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 CREBZFQ9NS37 354 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 PAG1Q9NWQ8 432 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 PPP2R3BQ9Y5P8 575 aa23.53■■□□□ 1.36
GCDH-202ENST00000421816 IDH1O75874 414 aaKnown RBP23.52■■□□□ 1.36
GCDH-202ENST00000421816 CELF2O95319 508 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms