RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
RFX3-205ENST00000420720 SULF1Q8IWU6 871 aa9.15□□□□□ -0.94
RFX3-205ENST00000420720 PI4KAP1Q8N8J0 262 aa9.15□□□□□ -0.94
RFX3-205ENST00000420720 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
RFX3-205ENST00000420720 TRIM17Q9Y577 477 aa9.15□□□□□ -0.94
RFX3-205ENST00000420720 XDHP47989 1333 aa9.14□□□□□ -0.95
RFX3-205ENST00000420720 IGKV5-2P06315 115 aa9.14□□□□□ -0.95
RFX3-205ENST00000420720 ANGEL2Q5VTE6 544 aaKnown RBP9.14□□□□□ -0.95
RFX3-205ENST00000420720 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
RFX3-205ENST00000420720 TTLL11Q8NHH1 800 aa9.14□□□□□ -0.95
RFX3-205ENST00000420720 CDCA5Q96FF9 252 aa9.14□□□□□ -0.95
RFX3-205ENST00000420720 CHMP4AQ9BY43 222 aa9.14□□□□□ -0.95
RFX3-205ENST00000420720 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
RFX3-205ENST00000420720 SCAF8Q9UPN6 1271 aaKnown RBP9.14□□□□□ -0.95
RFX3-205ENST00000420720 TTC28Q96AY4 2481 aa9.14□□□□□ -0.95
RFX3-205ENST00000420720 DDX60Q8IY21 1712 aaKnown RBP9.14□□□□□ -0.95
RFX3-205ENST00000420720 TAF1P21675 1872 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 USP17L3A6NCW0 530 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 USP17L4A6NCW7 530 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 TBC1D12O60347 775 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 FOSBP53539 338 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 CTSWP56202 376 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 ZNF280AP59817 542 aaPredicted RBP9.13□□□□□ -0.95
RFX3-205ENST00000420720 CWF19L2Q2TBE0 894 aaKnown RBP9.13□□□□□ -0.95
RFX3-205ENST00000420720 CCDC184Q52MB2 194 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 G2E3Q7L622 706 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 USP17L1Q7RTZ2 530 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 PODNQ7Z5L7 613 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 DEFB123Q8N688 67 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 GMLQ99445 158 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 CDC5LQ99459 802 aaKnown RBP9.13□□□□□ -0.95
RFX3-205ENST00000420720 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 GREM2Q9H772 168 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 MINPP1Q9UNW1 487 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
RFX3-205ENST00000420720 NEXNQ0ZGT2 675 aa9.12□□□□□ -0.95
RFX3-205ENST00000420720 MFSD10Q14728 455 aa9.12□□□□□ -0.95
RFX3-205ENST00000420720 TWISTNBQ3B726 338 aaPredicted RBP9.12□□□□□ -0.95
RFX3-205ENST00000420720 MOB2Q70IA6 237 aa9.12□□□□□ -0.95
RFX3-205ENST00000420720 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
RFX3-205ENST00000420720 MXD3Q9BW11 206 aa9.12□□□□□ -0.95
RFX3-205ENST00000420720 CFHR5Q9BXR6 569 aa9.12□□□□□ -0.95
RFX3-205ENST00000420720 PTPN22Q9Y2R2 807 aa9.12□□□□□ -0.95
RFX3-205ENST00000420720 POLR2AP24928 1970 aaKnown RBP9.12□□□□□ -0.95
RFX3-205ENST00000420720 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 H7C1W4 665 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 TM4SF4P48230 202 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 CCT4P50991 539 aaKnown RBP9.11□□□□□ -0.95
RFX3-205ENST00000420720 CAP1Q01518 475 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 NBPF9Q3BBW0 867 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 PRAMEF18Q5VWM3 479 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 UBE3BQ7Z3V4 1068 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 FAM122AQ96E09 287 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 ZNF333Q96JL9 665 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
RFX3-205ENST00000420720 MTMR10Q9NXD2 777 aa9.11□□□□□ -0.95
RFX3-205ENST00000420720 CACNA1AO00555 2505 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 A0A1W2PPC1 479 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 UBE2Q2LH0YL09 131 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 IGHMBP2P38935 993 aaKnown RBP9.1□□□□□ -0.95
RFX3-205ENST00000420720 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 WWC1Q8IX03 1113 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 EMILIN3Q9NT22 766 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 ZNF609O15014 1411 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 MED23Q9ULK4 1368 aa9.1□□□□□ -0.95
RFX3-205ENST00000420720 ITGA6P23229 1130 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 FKBP1BP68106 108 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 FLIIQ13045 1269 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 GCKRQ14397 625 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 CCDC27Q2M243 656 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 STRIP1Q5VSL9 837 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 OGFOD1Q8N543 542 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 SNX27Q96L92 541 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 COA1Q9GZY4 146 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 HCSTQ9UBK5 93 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 LEMD3Q9Y2U8 911 aa9.09□□□□□ -0.95
RFX3-205ENST00000420720 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
RFX3-205ENST00000420720 ZNF804BA4D1E1 1349 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 SNAP23O00161 211 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 WNT10BO00744 389 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 SASH1O94885 1247 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 CSF1RP07333 972 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 KLRK1P26718 216 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 PDE4AP27815 886 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 CASP7P55210 303 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 GTF2IP78347 998 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
RFX3-205ENST00000420720 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
RFX3-205ENST00000420720 TTLL5Q6EMB2 1281 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 DPF3Q92784 378 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 KCTD12Q96CX2 325 aaKnown RBP9.08□□□□□ -0.96
RFX3-205ENST00000420720 DDX27Q96GQ7 796 aaKnown RBP9.08□□□□□ -0.96
RFX3-205ENST00000420720 MPHOSPH8Q99549 860 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 LARP6Q9BRS8 491 aaKnown RBP9.08□□□□□ -0.96
RFX3-205ENST00000420720 PLA2G12BQ9BX93 195 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms