RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 TIMM10P62072 90 aa22.46■■□□□ 1.19
ECHDC3-202ENST00000420401 MFSD14BQ5SR56 506 aa22.46■■□□□ 1.19
ECHDC3-202ENST00000420401 CERS5Q8N5B7 392 aa22.46■■□□□ 1.19
ECHDC3-202ENST00000420401 TBC1D22AQ8WUA7 517 aa22.46■■□□□ 1.19
ECHDC3-202ENST00000420401 A0A1B0GUL7 405 aa22.45■■□□□ 1.18
ECHDC3-202ENST00000420401 CHAF1AQ13111 956 aaPredicted RBP22.45■■□□□ 1.18
ECHDC3-202ENST00000420401 SULF1Q8IWU6 871 aa22.45■■□□□ 1.18
ECHDC3-202ENST00000420401 NEUROD6Q96NK8 337 aa22.45■■□□□ 1.18
ECHDC3-202ENST00000420401 SCARF1Q14162 830 aa22.44■■□□□ 1.18
ECHDC3-202ENST00000420401 F8W031 263 aaPredicted RBP22.43■■□□□ 1.18
ECHDC3-202ENST00000420401 ADORA1P30542 326 aa22.43■■□□□ 1.18
ECHDC3-202ENST00000420401 HSP90AB4PQ58FF6 505 aa22.43■■□□□ 1.18
ECHDC3-202ENST00000420401 XAGE2Q96GT9 111 aa22.43■■□□□ 1.18
ECHDC3-202ENST00000420401 GPR108Q9NPR9 543 aa22.43■■□□□ 1.18
ECHDC3-202ENST00000420401 SEMA3EO15041 775 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 SLC10A3P09131 477 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 GORABQ5T7V8 394 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 CCDC102BQ68D86 513 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 CTU1Q7Z7A3 348 aaKnown RBP22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 ERC1Q8IUD2 1116 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 WDR66Q8TBY9 1149 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 CSRNP1Q96S65 589 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 GGA3Q9NZ52 723 aa22.42■■□□□ 1.18
ECHDC3-202ENST00000420401 ZNF646O15015 1829 aaPredicted RBP22.41■■□□□ 1.18
ECHDC3-202ENST00000420401 ZBTB22O15209 634 aa22.41■■□□□ 1.18
ECHDC3-202ENST00000420401 DLGAP5Q15398 846 aa22.41■■□□□ 1.18
ECHDC3-202ENST00000420401 REM2Q8IYK8 340 aaPredicted RBP22.41■■□□□ 1.18
ECHDC3-202ENST00000420401 DENND2AQ9ULE3 1009 aa22.41■■□□□ 1.18
ECHDC3-202ENST00000420401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.41■■□□□ 1.18
ECHDC3-202ENST00000420401 PHKA1P46020 1223 aa22.4■■□□□ 1.18
ECHDC3-202ENST00000420401 ANGEL2Q5VTE6 544 aaKnown RBP22.4■■□□□ 1.18
ECHDC3-202ENST00000420401 SIRT2Q8IXJ6 389 aa22.4■■□□□ 1.18
ECHDC3-202ENST00000420401 CDCA5Q96FF9 252 aa22.4■■□□□ 1.18
ECHDC3-202ENST00000420401 TTF2Q9UNY4 1162 aaKnown RBP22.4■■□□□ 1.18
ECHDC3-202ENST00000420401 SUGT1Q9Y2Z0 365 aa22.4■■□□□ 1.18
ECHDC3-202ENST00000420401 WNT10BO00744 389 aa22.39■■□□□ 1.17
ECHDC3-202ENST00000420401 NBPF9Q3BBW0 867 aa22.39■■□□□ 1.17
ECHDC3-202ENST00000420401 TNNI3KQ59H18 835 aa22.39■■□□□ 1.17
ECHDC3-202ENST00000420401 MTMR14Q8NCE2 650 aa22.39■■□□□ 1.17
ECHDC3-202ENST00000420401 EXOC6BQ9Y2D4 811 aa22.39■■□□□ 1.17
ECHDC3-202ENST00000420401 FPGT-TNNI3KV9GXZ4 949 aa22.39■■□□□ 1.17
ECHDC3-202ENST00000420401 PITPNM2Q9BZ72 1349 aa22.38■■□□□ 1.17
ECHDC3-202ENST00000420401 RBM5P52756 815 aaKnown RBP eCLIP22.38■■□□□ 1.17
ECHDC3-202ENST00000420401 CFAP100Q494V2 611 aa22.38■■□□□ 1.17
ECHDC3-202ENST00000420401 SERPINA10Q9UK55 444 aa22.38■■□□□ 1.17
ECHDC3-202ENST00000420401 ASTN2O75129 1339 aaPredicted RBP22.37■■□□□ 1.17
ECHDC3-202ENST00000420401 ZBED3Q96IU2 234 aaPredicted RBP22.37■■□□□ 1.17
ECHDC3-202ENST00000420401 MYO1BO43795 1136 aa22.36■■□□□ 1.17
ECHDC3-202ENST00000420401 PRPF38BQ5VTL8 546 aaKnown RBP22.36■■□□□ 1.17
ECHDC3-202ENST00000420401 MAST3O60307 1309 aa22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 PDS5AQ29RF7 1337 aaKnown RBP22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 RAB11FIP3O75154 756 aa22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 UQCRFS1P1P0C7P4 283 aa22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 HDLBPQ00341 1268 aaKnown RBP22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 CCDC158Q5M9N0 1113 aa22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 RASAL3Q86YV0 1011 aa22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 ZGPATQ8N5A5 531 aaKnown RBP22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 MRIQ9BWK5 157 aa22.35■■□□□ 1.17
ECHDC3-202ENST00000420401 ARAP2Q8WZ64 1704 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 SALL1Q9NSC2 1324 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 SPDYE2BA6NHP3 402 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 SPDYE6P0CI01 402 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 CRKP46108 304 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 FKBP1BP68106 108 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 RASGRF1Q13972 1273 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 RHPN1Q8TCX5 695 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 KIF1BPQ96EK5 621 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 CRBNQ96SW2 442 aa22.34■■□□□ 1.17
ECHDC3-202ENST00000420401 PAPPA2Q9BXP8 1791 aa22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 GRIK5Q16478 980 aa22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 PKN2Q16513 984 aaKnown RBP22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 TTC39AQ5SRH9 613 aa22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 APOBEC3FQ8IUX4 373 aaKnown RBP22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 TEKT1Q969V4 418 aa22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 PRMT6Q96LA8 375 aaPredicted RBP22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 DBNDD2Q9BQY9 259 aa22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 HPS5Q9UPZ3 1129 aa22.33■■□□□ 1.17
ECHDC3-202ENST00000420401 COL1A1P02452 1464 aaPredicted RBP22.33■■□□□ 1.16
ECHDC3-202ENST00000420401 LDHBP07195 334 aaKnown RBP22.32■■□□□ 1.16
ECHDC3-202ENST00000420401 ARID4AP29374 1257 aaPredicted RBP22.32■■□□□ 1.16
ECHDC3-202ENST00000420401 EAF2Q96CJ1 260 aaPredicted RBP22.32■■□□□ 1.16
ECHDC3-202ENST00000420401 PCDHAC2Q9Y5I4 1007 aa22.32■■□□□ 1.16
ECHDC3-202ENST00000420401 APBB1O00213 710 aa22.31■■□□□ 1.16
ECHDC3-202ENST00000420401 SPTY2D1Q68D10 685 aaPredicted RBP22.31■■□□□ 1.16
ECHDC3-202ENST00000420401 AACSQ86V21 672 aa22.31■■□□□ 1.16
ECHDC3-202ENST00000420401 CLASRPQ8N2M8 674 aaKnown RBP22.31■■□□□ 1.16
ECHDC3-202ENST00000420401 SPATA5Q8NB90 893 aa22.31■■□□□ 1.16
ECHDC3-202ENST00000420401 CCDC8Q9H0W5 538 aaPredicted RBP22.31■■□□□ 1.16
ECHDC3-202ENST00000420401 AAMPQ13685 434 aa22.3■■□□□ 1.16
ECHDC3-202ENST00000420401 HHIPL2Q6UWX4 724 aa22.3■■□□□ 1.16
ECHDC3-202ENST00000420401 ZNF512BQ96KM6 892 aaPredicted RBP22.3■■□□□ 1.16
ECHDC3-202ENST00000420401 IL1RAPL2Q9NP60 686 aa22.3■■□□□ 1.16
ECHDC3-202ENST00000420401 HMG20BQ9P0W2 317 aa22.3■■□□□ 1.16
ECHDC3-202ENST00000420401 DBNLQ9UJU6 430 aaKnown RBP22.3■■□□□ 1.16
ECHDC3-202ENST00000420401 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
ECHDC3-202ENST00000420401 TBC1D8O95759 1140 aa22.29■■□□□ 1.16
ECHDC3-202ENST00000420401 TTLL12Q14166 644 aaPredicted RBP22.29■■□□□ 1.16
ECHDC3-202ENST00000420401 ZDHHC15Q96MV8 337 aa22.29■■□□□ 1.16
ECHDC3-202ENST00000420401 ABCF2Q9UG63 623 aa22.29■■□□□ 1.16
ECHDC3-202ENST00000420401 CLRN2A0PK11 232 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms