RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 RAB11FIP3O75154 756 aa20.35■□□□□ 0.85
SEC22C-206ENST00000420163 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
SEC22C-206ENST00000420163 MCAMP43121 646 aa20.35■□□□□ 0.85
SEC22C-206ENST00000420163 CRKP46108 304 aa20.35■□□□□ 0.85
SEC22C-206ENST00000420163 KIF1BPQ96EK5 621 aa20.35■□□□□ 0.85
SEC22C-206ENST00000420163 SERPINA10Q9UK55 444 aa20.35■□□□□ 0.85
SEC22C-206ENST00000420163 PITPNM2Q9BZ72 1349 aa20.34■□□□□ 0.85
SEC22C-206ENST00000420163 SPATA5Q8NB90 893 aa20.34■□□□□ 0.85
SEC22C-206ENST00000420163 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
SEC22C-206ENST00000420163 DCTPP1Q9H773 170 aa20.34■□□□□ 0.85
SEC22C-206ENST00000420163 MAST2Q6P0Q8 1798 aa20.34■□□□□ 0.85
SEC22C-206ENST00000420163 UQCRFS1P1P0C7P4 283 aa20.33■□□□□ 0.85
SEC22C-206ENST00000420163 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.85
SEC22C-206ENST00000420163 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.85
SEC22C-206ENST00000420163 TTC39AQ5SRH9 613 aa20.33■□□□□ 0.85
SEC22C-206ENST00000420163 CST9Q5W186 159 aa20.33■□□□□ 0.85
SEC22C-206ENST00000420163 SULF1Q8IWU6 871 aa20.33■□□□□ 0.85
SEC22C-206ENST00000420163 SNRKQ9NRH2 765 aa20.33■□□□□ 0.85
SEC22C-206ENST00000420163 SUGT1Q9Y2Z0 365 aa20.33■□□□□ 0.85
SEC22C-206ENST00000420163 DOCK2Q92608 1830 aa20.32■□□□□ 0.84
SEC22C-206ENST00000420163 CLRN2A0PK11 232 aa20.32■□□□□ 0.84
SEC22C-206ENST00000420163 SMARCA5O60264 1052 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-206ENST00000420163 DIXDC1Q155Q3 683 aa20.32■□□□□ 0.84
SEC22C-206ENST00000420163 CCDC158Q5M9N0 1113 aa20.32■□□□□ 0.84
SEC22C-206ENST00000420163 TBC1D9Q6ZT07 1266 aa20.32■□□□□ 0.84
SEC22C-206ENST00000420163 CLASRPQ8N2M8 674 aaKnown RBP20.32■□□□□ 0.84
SEC22C-206ENST00000420163 CREBZFQ9NS37 354 aa20.32■□□□□ 0.84
SEC22C-206ENST00000420163 ABCF2Q9UG63 623 aa20.32■□□□□ 0.84
SEC22C-206ENST00000420163 MAST3O60307 1309 aa20.31■□□□□ 0.84
SEC22C-206ENST00000420163 TMEM88BA6NKF7 163 aa20.31■□□□□ 0.84
SEC22C-206ENST00000420163 CELF2O95319 508 aaKnown RBP20.31■□□□□ 0.84
SEC22C-206ENST00000420163 LDHBP07195 334 aaKnown RBP20.31■□□□□ 0.84
SEC22C-206ENST00000420163 HDLBPQ00341 1268 aaKnown RBP20.31■□□□□ 0.84
SEC22C-206ENST00000420163 TEKT1Q969V4 418 aa20.31■□□□□ 0.84
SEC22C-206ENST00000420163 CDCA5Q96FF9 252 aa20.31■□□□□ 0.84
SEC22C-206ENST00000420163 TDRD3Q9H7E2 651 aaKnown RBP20.31■□□□□ 0.84
SEC22C-206ENST00000420163 ZNF408Q9H9D4 720 aa20.31■□□□□ 0.84
SEC22C-206ENST00000420163 PRAMEF18Q5VWM3 479 aa20.3■□□□□ 0.84
SEC22C-206ENST00000420163 ZNF384Q8TF68 577 aa20.3■□□□□ 0.84
SEC22C-206ENST00000420163 ZNF512BQ96KM6 892 aaPredicted RBP20.3■□□□□ 0.84
SEC22C-206ENST00000420163 LRRCC1Q9C099 1032 aa20.3■□□□□ 0.84
SEC22C-206ENST00000420163 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
SEC22C-206ENST00000420163 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
SEC22C-206ENST00000420163 ZDHHC15Q96MV8 337 aa20.29■□□□□ 0.84
SEC22C-206ENST00000420163 MRIQ9BWK5 157 aa20.29■□□□□ 0.84
SEC22C-206ENST00000420163 ZNF70Q9UC06 446 aaPredicted RBP20.29■□□□□ 0.84
SEC22C-206ENST00000420163 DAGLAQ9Y4D2 1042 aa20.29■□□□□ 0.84
SEC22C-206ENST00000420163 NDUFB9Q9Y6M9 179 aa20.29■□□□□ 0.84
SEC22C-206ENST00000420163 ZAP70P43403 619 aa20.28■□□□□ 0.84
SEC22C-206ENST00000420163 APOBEC3HQ6NTF7 200 aaKnown RBP20.28■□□□□ 0.84
SEC22C-206ENST00000420163 HHIPL2Q6UWX4 724 aa20.28■□□□□ 0.84
SEC22C-206ENST00000420163 ZGPATQ8N5A5 531 aaKnown RBP20.28■□□□□ 0.84
SEC22C-206ENST00000420163 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
SEC22C-206ENST00000420163 VEZTQ9HBM0 779 aa20.28■□□□□ 0.84
SEC22C-206ENST00000420163 MYO1BO43795 1136 aa20.27■□□□□ 0.84
SEC22C-206ENST00000420163 CYP2E1P05181 493 aaPredicted RBP20.27■□□□□ 0.84
SEC22C-206ENST00000420163 IFIT2P09913 472 aaKnown RBP20.27■□□□□ 0.84
SEC22C-206ENST00000420163 PIH1D3Q9NQM4 214 aaKnown RBP20.27■□□□□ 0.84
SEC22C-206ENST00000420163 CACNB3P54284 484 aa20.26■□□□□ 0.83
SEC22C-206ENST00000420163 MECOMQ03112 1051 aa20.26■□□□□ 0.83
SEC22C-206ENST00000420163 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
SEC22C-206ENST00000420163 AAMPQ13685 434 aa20.26■□□□□ 0.83
SEC22C-206ENST00000420163 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
SEC22C-206ENST00000420163 DZIP1Q86YF9 867 aaKnown RBP20.26■□□□□ 0.83
SEC22C-206ENST00000420163 ABT1Q9ULW3 272 aaKnown RBP20.26■□□□□ 0.83
SEC22C-206ENST00000420163 CDK5RAP2Q96SN8 1893 aa20.26■□□□□ 0.83
SEC22C-206ENST00000420163 PAPPA2Q9BXP8 1791 aa20.26■□□□□ 0.83
SEC22C-206ENST00000420163 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
SEC22C-206ENST00000420163 SPTY2D1Q68D10 685 aaPredicted RBP20.25■□□□□ 0.83
SEC22C-206ENST00000420163 NSUN4Q96CB9 384 aaKnown RBP20.25■□□□□ 0.83
SEC22C-206ENST00000420163 DEFB129Q9H1M3 183 aa20.25■□□□□ 0.83
SEC22C-206ENST00000420163 MKRN1Q9UHC7 482 aaKnown RBP20.25■□□□□ 0.83
SEC22C-206ENST00000420163 GAKO14976 1311 aa20.25■□□□□ 0.83
SEC22C-206ENST00000420163 MYH7P12883 1935 aa20.24■□□□□ 0.83
SEC22C-206ENST00000420163 ANTXR1Q9H6X2 564 aa20.24■□□□□ 0.83
SEC22C-206ENST00000420163 RAI14Q9P0K7 980 aa20.24■□□□□ 0.83
SEC22C-206ENST00000420163 TLL2Q9Y6L7 1015 aa20.24■□□□□ 0.83
SEC22C-206ENST00000420163 AK9Q5TCS8 1911 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 CNTNAP1P78357 1384 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 TCP10L2B9ZVM9 353 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 SAPCD2Q86UD0 394 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 KLRG1Q96E93 195 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 GBA2Q9HCG7 927 aaPredicted RBP20.23■□□□□ 0.83
SEC22C-206ENST00000420163 LRP2BPQ9P2M1 347 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 MROH7-TTC4A0A0A0MT08 1334 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 OTOFQ9HC10 1997 aa20.23■□□□□ 0.83
SEC22C-206ENST00000420163 RASA3Q14644 834 aa20.22■□□□□ 0.83
SEC22C-206ENST00000420163 MOB2Q70IA6 237 aa20.22■□□□□ 0.83
SEC22C-206ENST00000420163 RASSF10A6NK89 507 aa20.21■□□□□ 0.83
SEC22C-206ENST00000420163 IGHDP01880 384 aa20.21■□□□□ 0.83
SEC22C-206ENST00000420163 FAM163AQ96GL9 167 aaPredicted RBP20.21■□□□□ 0.83
SEC22C-206ENST00000420163 PPP2R3BQ9Y5P8 575 aa20.21■□□□□ 0.83
SEC22C-206ENST00000420163 FOCADQ5VW36 1801 aa20.2■□□□□ 0.82
SEC22C-206ENST00000420163 BTDP43251 543 aa20.2■□□□□ 0.82
SEC22C-206ENST00000420163 NFIAQ12857 509 aa20.2■□□□□ 0.82
SEC22C-206ENST00000420163 DEFB115Q30KQ5 88 aa20.2■□□□□ 0.82
SEC22C-206ENST00000420163 NBPF12Q5TAG4 269 aaPredicted RBP20.2■□□□□ 0.82
SEC22C-206ENST00000420163 TSHZ3Q63HK5 1081 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms