RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TBC1D16Q8TBP0 767 aa24.93■■□□□ 1.58
GPC1-202ENST00000420138 EPB41L4AQ9HCS5 686 aaPredicted RBP24.93■■□□□ 1.58
GPC1-202ENST00000420138 GGA1Q9UJY5 639 aa24.93■■□□□ 1.58
GPC1-202ENST00000420138 ATP6V0A2Q9Y487 856 aa24.93■■□□□ 1.58
GPC1-202ENST00000420138 CYP7A1P22680 504 aa24.92■■□□□ 1.58
GPC1-202ENST00000420138 ALX1Q15699 326 aa24.92■■□□□ 1.58
GPC1-202ENST00000420138 ME3Q16798 604 aa24.92■■□□□ 1.58
GPC1-202ENST00000420138 IMMTQ16891 758 aaKnown RBP24.92■■□□□ 1.58
GPC1-202ENST00000420138 NBPF3Q9H094 633 aa24.92■■□□□ 1.58
GPC1-202ENST00000420138 PATL2C9JE40 543 aaKnown RBP24.91■■□□□ 1.58
GPC1-202ENST00000420138 ZBTB7AO95365 584 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 HAND2P61296 217 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 EXOSC10Q01780 885 aaKnown RBP24.91■■□□□ 1.58
GPC1-202ENST00000420138 PKP1Q13835 747 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 C2CD5Q86YS7 1000 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 MASTLQ96GX5 879 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 ZSCAN31Q96LW9 406 aaPredicted RBP24.91■■□□□ 1.58
GPC1-202ENST00000420138 MYH13Q9UKX3 1938 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 ZMYM6O95789 1325 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 GSG1L2A8MUP6 293 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 HMGB1P09429 215 aaKnown RBP24.91■■□□□ 1.58
GPC1-202ENST00000420138 ALDH1B1P30837 517 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 CHAF1AQ13111 956 aaPredicted RBP24.91■■□□□ 1.58
GPC1-202ENST00000420138 MIGA1Q8NAN2 632 aa24.91■■□□□ 1.58
GPC1-202ENST00000420138 TNPO1Q92973 898 aaKnown RBP24.91■■□□□ 1.58
GPC1-202ENST00000420138 NSUN4Q96CB9 384 aaKnown RBP24.91■■□□□ 1.58
GPC1-202ENST00000420138 H0YIN7 160 aa24.9■■□□□ 1.58
GPC1-202ENST00000420138 PRKAB2O43741 272 aa24.9■■□□□ 1.58
GPC1-202ENST00000420138 ANKRD1Q15327 319 aa24.9■■□□□ 1.58
GPC1-202ENST00000420138 DHX32Q7L7V1 743 aaKnown RBP24.9■■□□□ 1.58
GPC1-202ENST00000420138 RIOK1Q9BRS2 568 aaKnown RBP24.9■■□□□ 1.58
GPC1-202ENST00000420138 SALL1Q9NSC2 1324 aa24.89■■□□□ 1.58
GPC1-202ENST00000420138 PRDX5P30044 214 aa24.89■■□□□ 1.58
GPC1-202ENST00000420138 ZNF804AQ7Z570 1209 aa24.89■■□□□ 1.58
GPC1-202ENST00000420138 IFNL3Q8IZI9 196 aa24.89■■□□□ 1.58
GPC1-202ENST00000420138 SH2B1Q9NRF2 756 aaPredicted RBP24.89■■□□□ 1.58
GPC1-202ENST00000420138 JAG2Q9Y219 1238 aa24.89■■□□□ 1.58
GPC1-202ENST00000420138 DLEC1Q9Y238 1755 aa24.89■■□□□ 1.58
GPC1-202ENST00000420138 KIF13BQ9NQT8 1826 aa24.89■■□□□ 1.57
GPC1-202ENST00000420138 ZNF213O14771 459 aa24.89■■□□□ 1.57
GPC1-202ENST00000420138 MECOMQ03112 1051 aa24.89■■□□□ 1.57
GPC1-202ENST00000420138 OLFM4Q6UX06 510 aa24.89■■□□□ 1.57
GPC1-202ENST00000420138 MTFR1LQ9H019 292 aa24.89■■□□□ 1.57
GPC1-202ENST00000420138 C10orf71Q711Q0 1435 aa24.88■■□□□ 1.57
GPC1-202ENST00000420138 APPP05067 770 aa24.88■■□□□ 1.57
GPC1-202ENST00000420138 ZNF622Q969S3 477 aaKnown RBP eCLIP24.88■■□□□ 1.57
GPC1-202ENST00000420138 AGXT2Q9BYV1 514 aa24.88■■□□□ 1.57
GPC1-202ENST00000420138 CD209Q9NNX6 404 aa24.88■■□□□ 1.57
GPC1-202ENST00000420138 ZDHHC9Q9Y397 364 aa24.88■■□□□ 1.57
GPC1-202ENST00000420138 IL1R1P14778 569 aa24.87■■□□□ 1.57
GPC1-202ENST00000420138 GNAT2P19087 354 aa24.87■■□□□ 1.57
GPC1-202ENST00000420138 GSE1Q14687 1217 aa24.87■■□□□ 1.57
GPC1-202ENST00000420138 NAA16Q6N069 864 aaPredicted RBP24.87■■□□□ 1.57
GPC1-202ENST00000420138 Q6ZUG5 572 aa24.87■■□□□ 1.57
GPC1-202ENST00000420138 DUOX1Q9NRD9 1551 aa24.87■■□□□ 1.57
GPC1-202ENST00000420138 NUCB2P80303 420 aa24.86■■□□□ 1.57
GPC1-202ENST00000420138 LRRC2Q9BYS8 371 aa24.86■■□□□ 1.57
GPC1-202ENST00000420138 ATF5Q9Y2D1 282 aaPredicted RBP24.86■■□□□ 1.57
GPC1-202ENST00000420138 CHRNA5P30532 468 aa24.86■■□□□ 1.57
GPC1-202ENST00000420138 STYK1Q6J9G0 422 aa24.86■■□□□ 1.57
GPC1-202ENST00000420138 TBC1D10CQ8IV04 446 aa24.86■■□□□ 1.57
GPC1-202ENST00000420138 CCDC83Q8IWF9 413 aa24.86■■□□□ 1.57
GPC1-202ENST00000420138 SLC4A4Q9Y6R1 1079 aa24.86■■□□□ 1.57
GPC1-202ENST00000420138 MAGEB6P1A0A0J9YX57 407 aa24.85■■□□□ 1.57
GPC1-202ENST00000420138 MB21D2Q8IYB1 491 aaPredicted RBP24.85■■□□□ 1.57
GPC1-202ENST00000420138 NECAB1Q8N987 351 aa24.85■■□□□ 1.57
GPC1-202ENST00000420138 WDR66Q8TBY9 1149 aa24.85■■□□□ 1.57
GPC1-202ENST00000420138 SLX4Q8IY92 1834 aa24.85■■□□□ 1.57
GPC1-202ENST00000420138 LAMA4Q16363 1823 aa24.84■■□□□ 1.57
GPC1-202ENST00000420138 PSDA5PKW4 1024 aaPredicted RBP24.84■■□□□ 1.57
GPC1-202ENST00000420138 POLD1P28340 1107 aa24.84■■□□□ 1.57
GPC1-202ENST00000420138 DYNLL1P63167 89 aaKnown RBP24.84■■□□□ 1.57
GPC1-202ENST00000420138 GRIK5Q16478 980 aa24.84■■□□□ 1.57
GPC1-202ENST00000420138 FBXL16Q8N461 479 aa24.84■■□□□ 1.57
GPC1-202ENST00000420138 NKX2-3Q8TAU0 364 aa24.84■■□□□ 1.57
GPC1-202ENST00000420138 C6orf229H3BNL8 230 aa24.84■■□□□ 1.57
GPC1-202ENST00000420138 MCM4P33991 863 aa24.83■■□□□ 1.57
GPC1-202ENST00000420138 TMED8Q6PL24 325 aaPredicted RBP24.83■■□□□ 1.57
GPC1-202ENST00000420138 BRF1Q92994 677 aa24.83■■□□□ 1.57
GPC1-202ENST00000420138 NAPBQ9H115 298 aa24.83■■□□□ 1.57
GPC1-202ENST00000420138 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.83■■□□□ 1.57
GPC1-202ENST00000420138 IGSF3O75054 1194 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 ANTXR2P58335 489 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 CLEC17AQ6ZS10 378 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 CHST3Q7LGC8 479 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 TMX4Q9H1E5 349 aaPredicted RBP24.82■■□□□ 1.56
GPC1-202ENST00000420138 TACC3Q9Y6A5 838 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 SPTY2D1Q68D10 685 aaPredicted RBP24.82■■□□□ 1.56
GPC1-202ENST00000420138 MPNDQ8N594 471 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 NCOA7Q8NI08 942 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 SDR42E1Q8WUS8 393 aa24.82■■□□□ 1.56
GPC1-202ENST00000420138 CNKSR1Q969H4 720 aa24.81■■□□□ 1.56
GPC1-202ENST00000420138 NACAP1Q9BZK3 213 aa24.8■■□□□ 1.56
GPC1-202ENST00000420138 MAST2Q6P0Q8 1798 aa24.8■■□□□ 1.56
GPC1-202ENST00000420138 DTNBO60941 627 aa24.79■■□□□ 1.56
GPC1-202ENST00000420138 BRD1O95696 1058 aa24.79■■□□□ 1.56
GPC1-202ENST00000420138 LDHBP07195 334 aaKnown RBP24.79■■□□□ 1.56
GPC1-202ENST00000420138 DPP8Q6V1X1 898 aaPredicted RBP24.79■■□□□ 1.56
GPC1-202ENST00000420138 ILDR2Q71H61 639 aa24.79■■□□□ 1.56
GPC1-202ENST00000420138 INCENPQ9NQS7 918 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms