RNA–Protein interactions for RNA: ENST00000419525.5

CENPA-203, Transcript of centromere protein A, humanhuman

TSL 5

Gene CENPA, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-203ENST00000419525 IGF2BP3O00425 579 aaKnown RBP eCLIP20.83■□□□□ 0.93
CENPA-203ENST00000419525 PDE8BO95263 885 aa20.83■□□□□ 0.93
CENPA-203ENST00000419525 SLC34A2O95436 690 aa20.83■□□□□ 0.93
CENPA-203ENST00000419525 CAVIN4Q5BKX8 364 aa20.83■□□□□ 0.93
CENPA-203ENST00000419525 VGLL2Q8N8G2 317 aa20.83■□□□□ 0.93
CENPA-203ENST00000419525 TBC1D22AQ8WUA7 517 aa20.83■□□□□ 0.93
CENPA-203ENST00000419525 GJA5P36382 358 aa20.82■□□□□ 0.92
CENPA-203ENST00000419525 TNNI2P48788 182 aa20.82■□□□□ 0.92
CENPA-203ENST00000419525 HDLBPQ00341 1268 aaKnown RBP20.82■□□□□ 0.92
CENPA-203ENST00000419525 OTUD7BQ6GQQ9 843 aa20.82■□□□□ 0.92
CENPA-203ENST00000419525 SSH1Q8WYL5 1049 aa20.82■□□□□ 0.92
CENPA-203ENST00000419525 TEPSINQ96N21 525 aa20.82■□□□□ 0.92
CENPA-203ENST00000419525 IQSEC3Q9UPP2 1182 aaPredicted RBP20.82■□□□□ 0.92
CENPA-203ENST00000419525 FRAT2O75474 233 aaPredicted RBP20.81■□□□□ 0.92
CENPA-203ENST00000419525 CHAF1AQ13111 956 aaPredicted RBP20.81■□□□□ 0.92
CENPA-203ENST00000419525 USP44Q9H0E7 712 aa20.81■□□□□ 0.92
CENPA-203ENST00000419525 KIF16BQ96L93 1317 aa20.8■□□□□ 0.92
CENPA-203ENST00000419525 TCP10L2B9ZVM9 353 aa20.8■□□□□ 0.92
CENPA-203ENST00000419525 GRIK5Q16478 980 aa20.8■□□□□ 0.92
CENPA-203ENST00000419525 TESPA1A2RU30 521 aaPredicted RBP20.79■□□□□ 0.92
CENPA-203ENST00000419525 SLFN5Q08AF3 891 aa20.79■□□□□ 0.92
CENPA-203ENST00000419525 KLHDC4Q8TBB5 520 aa20.79■□□□□ 0.92
CENPA-203ENST00000419525 TEKT1Q969V4 418 aa20.79■□□□□ 0.92
CENPA-203ENST00000419525 TMEM39BQ9GZU3 492 aa20.79■□□□□ 0.92
CENPA-203ENST00000419525 ELP3Q9H9T3 547 aa20.79■□□□□ 0.92
CENPA-203ENST00000419525 PUM3Q15397 648 aaKnown RBP20.78■□□□□ 0.92
CENPA-203ENST00000419525 ALDH1L2Q3SY69 923 aa20.78■□□□□ 0.92
CENPA-203ENST00000419525 CDAN1Q8IWY9 1227 aa20.78■□□□□ 0.92
CENPA-203ENST00000419525 OPTNQ96CV9 577 aa20.78■□□□□ 0.92
CENPA-203ENST00000419525 MRIQ9BWK5 157 aa20.78■□□□□ 0.92
CENPA-203ENST00000419525 SUGT1Q9Y2Z0 365 aa20.78■□□□□ 0.92
CENPA-203ENST00000419525 MAST3O60307 1309 aa20.78■□□□□ 0.92
CENPA-203ENST00000419525 IFIT1P09914 478 aaKnown RBP20.77■□□□□ 0.92
CENPA-203ENST00000419525 FGFR2P21802 821 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 BCAMP50895 628 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 CRHR2Q13324 411 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.77■□□□□ 0.92
CENPA-203ENST00000419525 OTOP1Q7RTM1 612 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 ERO1AQ96HE7 468 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 ZDHHC15Q96MV8 337 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 PTPN18Q99952 460 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 TRIM17Q9Y577 477 aa20.77■□□□□ 0.92
CENPA-203ENST00000419525 MAP3K9P80192 1104 aa20.76■□□□□ 0.91
CENPA-203ENST00000419525 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.76■□□□□ 0.91
CENPA-203ENST00000419525 TMOD2Q9NZR1 351 aa20.76■□□□□ 0.91
CENPA-203ENST00000419525 EYA2O00167 538 aa20.75■□□□□ 0.91
CENPA-203ENST00000419525 RFX5P48382 616 aaPredicted RBP20.75■□□□□ 0.91
CENPA-203ENST00000419525 VGLL4Q14135 290 aa20.75■□□□□ 0.91
CENPA-203ENST00000419525 FKBP1CQ5VVH2 108 aa20.75■□□□□ 0.91
CENPA-203ENST00000419525 MS4A4AQ96JQ5 239 aa20.75■□□□□ 0.91
CENPA-203ENST00000419525 CSADQ9Y600 493 aa20.75■□□□□ 0.91
CENPA-203ENST00000419525 SLC5A1P13866 664 aa20.74■□□□□ 0.91
CENPA-203ENST00000419525 FAM83AQ86UY5 434 aa20.74■□□□□ 0.91
CENPA-203ENST00000419525 SMC4Q9NTJ3 1288 aa20.74■□□□□ 0.91
CENPA-203ENST00000419525 RBBP6Q7Z6E9 1792 aaKnown RBP20.73■□□□□ 0.91
CENPA-203ENST00000419525 GTF2A2P52657 109 aa20.73■□□□□ 0.91
CENPA-203ENST00000419525 CACNB3P54284 484 aa20.73■□□□□ 0.91
CENPA-203ENST00000419525 PRPF38BQ5VTL8 546 aaKnown RBP20.73■□□□□ 0.91
CENPA-203ENST00000419525 APOBEC3HQ6NTF7 200 aaKnown RBP20.73■□□□□ 0.91
CENPA-203ENST00000419525 HHIPL2Q6UWX4 724 aa20.73■□□□□ 0.91
CENPA-203ENST00000419525 CD99L2Q8TCZ2 262 aa20.73■□□□□ 0.91
CENPA-203ENST00000419525 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
CENPA-203ENST00000419525 LPIN2Q92539 896 aa20.73■□□□□ 0.91
CENPA-203ENST00000419525 HOOK2Q96ED9 719 aa20.73■□□□□ 0.91
CENPA-203ENST00000419525 RPAP1Q9BWH6 1393 aaPredicted RBP20.72■□□□□ 0.91
CENPA-203ENST00000419525 HTTP42858 3142 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 CCL15-CCL14A0A0B4J2E2 113 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 SP3Q02447 781 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 CCL15Q16663 113 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
CENPA-203ENST00000419525 WDR66Q8TBY9 1149 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 BRI3BPQ8WY22 251 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 FBXO3Q9UK99 471 aa20.72■□□□□ 0.91
CENPA-203ENST00000419525 AK9Q5TCS8 1911 aa20.71■□□□□ 0.91
CENPA-203ENST00000419525 SPDYE5A6NIY4 337 aa20.71■□□□□ 0.91
CENPA-203ENST00000419525 ATG9AQ7Z3C6 839 aa20.71■□□□□ 0.91
CENPA-203ENST00000419525 OTUD5Q96G74 571 aa20.71■□□□□ 0.91
CENPA-203ENST00000419525 EFCC1Q9HA90 598 aa20.71■□□□□ 0.91
CENPA-203ENST00000419525 PTPN22Q9Y2R2 807 aa20.71■□□□□ 0.91
CENPA-203ENST00000419525 CT47B1P0C2W7 299 aaPredicted RBP20.7■□□□□ 0.9
CENPA-203ENST00000419525 UBTFL1P0CB47 393 aaPredicted RBP20.7■□□□□ 0.9
CENPA-203ENST00000419525 TAF1CQ15572 869 aaPredicted RBP20.7■□□□□ 0.9
CENPA-203ENST00000419525 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
CENPA-203ENST00000419525 ZFYVE28Q9HCC9 887 aa20.7■□□□□ 0.9
CENPA-203ENST00000419525 KIAA0100Q14667 2235 aaKnown RBP20.7■□□□□ 0.9
CENPA-203ENST00000419525 CIAO1O76071 339 aa20.69■□□□□ 0.9
CENPA-203ENST00000419525 DCAF15Q66K64 600 aa20.69■□□□□ 0.9
CENPA-203ENST00000419525 ERO1BQ86YB8 467 aa20.69■□□□□ 0.9
CENPA-203ENST00000419525 WRNIP1Q96S55 665 aa20.69■□□□□ 0.9
CENPA-203ENST00000419525 SNCAIPQ9Y6H5 919 aa20.69■□□□□ 0.9
CENPA-203ENST00000419525 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
CENPA-203ENST00000419525 CETPP11597 493 aa20.67■□□□□ 0.9
CENPA-203ENST00000419525 ARHGEF6Q15052 776 aa20.67■□□□□ 0.9
CENPA-203ENST00000419525 ATP2B3Q16720 1220 aa20.67■□□□□ 0.9
CENPA-203ENST00000419525 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
CENPA-203ENST00000419525 ZKSCAN4Q969J2 545 aaPredicted RBP20.67■□□□□ 0.9
CENPA-203ENST00000419525 SIL1Q9H173 461 aa20.67■□□□□ 0.9
CENPA-203ENST00000419525 GNL3LQ9NVN8 582 aaKnown RBP20.67■□□□□ 0.9
CENPA-203ENST00000419525 CEP126Q9P2H0 1117 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms