RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RBM19Q9Y4C8 960 aaKnown RBP9.1□□□□□ -0.95
HMGN1-205ENST00000419378 TTC24A2A3L6 582 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-205ENST00000419378 J3QL48 77 aa9.09□□□□□ -0.95
HMGN1-205ENST00000419378 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
HMGN1-205ENST00000419378 SEC13P55735 322 aa9.09□□□□□ -0.95
HMGN1-205ENST00000419378 NLGN1Q8N2Q7 840 aa9.09□□□□□ -0.95
HMGN1-205ENST00000419378 THUMPD2Q9BTF0 503 aaKnown RBP9.09□□□□□ -0.95
HMGN1-205ENST00000419378 TEX13AQ9BXU3 409 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-205ENST00000419378 SRP68Q9UHB9 627 aaKnown RBP9.09□□□□□ -0.95
HMGN1-205ENST00000419378 CD2APQ9Y5K6 639 aa9.09□□□□□ -0.95
HMGN1-205ENST00000419378 LAMB4A4D0S4 1761 aa9.09□□□□□ -0.95
HMGN1-205ENST00000419378 SCN7AQ01118 1682 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 BRD1O95696 1058 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 STAU1O95793 577 aaKnown RBP9.08□□□□□ -0.96
HMGN1-205ENST00000419378 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
HMGN1-205ENST00000419378 TMPOP42166 694 aaKnown RBP9.08□□□□□ -0.96
HMGN1-205ENST00000419378 RIPK4P57078 832 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 TAF7Q15545 349 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-205ENST00000419378 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 PNISRQ8TF01 805 aaKnown RBP9.08□□□□□ -0.96
HMGN1-205ENST00000419378 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 MIS18AQ9NYP9 233 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 ADAMTS8Q9UP79 889 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
HMGN1-205ENST00000419378 C10orf71Q711Q0 1435 aa9.07□□□□□ -0.96
HMGN1-205ENST00000419378 PRAMEF22A3QJZ6 481 aa9.07□□□□□ -0.96
HMGN1-205ENST00000419378 SNRPA1P09661 255 aaKnown RBP9.07□□□□□ -0.96
HMGN1-205ENST00000419378 EIF5P55010 431 aaKnown RBP9.07□□□□□ -0.96
HMGN1-205ENST00000419378 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
HMGN1-205ENST00000419378 USPL1Q5W0Q7 1092 aa9.07□□□□□ -0.96
HMGN1-205ENST00000419378 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
HMGN1-205ENST00000419378 RUNDC1Q96C34 613 aa9.07□□□□□ -0.96
HMGN1-205ENST00000419378 NARFQ9UHQ1 456 aa9.07□□□□□ -0.96
HMGN1-205ENST00000419378 RRP7AQ9Y3A4 280 aaKnown RBP9.07□□□□□ -0.96
HMGN1-205ENST00000419378 KIAA1551Q9HCM1 1747 aa9.07□□□□□ -0.96
HMGN1-205ENST00000419378 A1BGP04217 495 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 IL6STP40189 918 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-205ENST00000419378 DDR1Q08345 913 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 SWI5Q1ZZU3 235 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 CCDC184Q52MB2 194 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 TRIM67Q6ZTA4 783 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
HMGN1-205ENST00000419378 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 USP16Q9Y5T5 823 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 PXDNLA1KZ92 1463 aa9.06□□□□□ -0.96
HMGN1-205ENST00000419378 BCORQ6W2J9 1755 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 A0A087WZG4 1122 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 TMEM229AB2RXF0 380 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 ANP32CO43423 234 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 LGR5O75473 907 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 PIP4K2AP48426 406 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-205ENST00000419378 EIF4A1P60842 406 aaKnown RBP9.05□□□□□ -0.96
HMGN1-205ENST00000419378 GPR162Q16538 588 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 TOR4AQ9NXH8 423 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
HMGN1-205ENST00000419378 POLRMTO00411 1230 aaKnown RBP9.04□□□□□ -0.96
HMGN1-205ENST00000419378 YBX3P16989 372 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGN1-205ENST00000419378 SMPD1P17405 629 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 TM4SF1P30408 202 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 SCNN1DP51172 638 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 GDF10P55107 478 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 NFIXQ14938 502 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 CYP2U1Q7Z449 544 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
HMGN1-205ENST00000419378 ITPKCQ96DU7 683 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 TSPYL4Q9UJ04 414 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 NRXN2Q9P2S2 1712 aa9.04□□□□□ -0.96
HMGN1-205ENST00000419378 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-205ENST00000419378 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
HMGN1-205ENST00000419378 PRMT3O60678 531 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 ZIC2O95409 532 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-205ENST00000419378 ATP2B4P23634 1241 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
HMGN1-205ENST00000419378 KCNA1Q09470 495 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 CBLBQ13191 982 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 PHLDB3Q6NSJ2 640 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
HMGN1-205ENST00000419378 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
HMGN1-205ENST00000419378 NBPF15Q8N660 670 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 HINFPQ9BQA5 517 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 KLF16Q9BXK1 252 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-205ENST00000419378 ZFAND3Q9H8U3 227 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 ETNK1Q9HBU6 452 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 BABAM1Q9NWV8 329 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
HMGN1-205ENST00000419378 CHD4Q14839 1912 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 APAF1O14727 1248 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 CAMTA2O94983 1202 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 GNRH1P01148 92 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 YY1P25490 414 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 TGFB2P61812 414 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 PRR20EP86478 221 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 PRR20CP86479 221 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 PRR20DP86480 221 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 PRR20BP86481 221 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 PRR20AP86496 221 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 B4GALNT3Q6L9W6 998 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 PRIMPOLQ96LW4 560 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 MRS2Q9HD23 443 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms