RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CHRNDQ07001 517 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 USP17L1Q7RTZ2 530 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 PRDM15P57071 1507 aaPredicted RBP19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 KDM4FA0A1W2PPD8 638 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 FKBP15Q5T1M5 1219 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 TTC41PQ6P2S7 1318 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 RAD50Q92878 1312 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 ORC3Q9UBD5 711 aaPredicted RBP19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 PCCAP05165 728 aaPredicted RBP19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 CHST3Q7LGC8 479 aa19.41■□□□□ 0.7
SYNGAP1-202ENST00000418600 USP14P54578 494 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 EZH2Q15910 746 aaKnown RBP19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 ZNF354CQ86Y25 554 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 TRIM6Q9C030 488 aaPredicted RBP19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 GINS2Q9Y248 185 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 TET3O43151 1660 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 KCTD2Q14681 263 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 CHURC1Q8WUH1 139 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 SYNE4Q8N205 404 aa19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 ZNF397Q8NF99 534 aaPredicted RBP19.4■□□□□ 0.7
SYNGAP1-202ENST00000418600 ARHGEF40Q8TER5 1519 aa19.39■□□□□ 0.7
SYNGAP1-202ENST00000418600 USP19O94966 1318 aa19.39■□□□□ 0.7
SYNGAP1-202ENST00000418600 ANKRD62A6NC57 917 aa19.39■□□□□ 0.7
SYNGAP1-202ENST00000418600 AP5M1Q9H0R1 490 aa19.39■□□□□ 0.7
SYNGAP1-202ENST00000418600 ZBTB24O43167 697 aaPredicted RBP19.39■□□□□ 0.69
SYNGAP1-202ENST00000418600 NMIQ13287 307 aaPredicted RBP19.39■□□□□ 0.69
SYNGAP1-202ENST00000418600 MYOM2P54296 1465 aa19.39■□□□□ 0.69
SYNGAP1-202ENST00000418600 BTDP43251 543 aa19.39■□□□□ 0.69
SYNGAP1-202ENST00000418600 ERLIN2O94905 339 aa19.39■□□□□ 0.69
SYNGAP1-202ENST00000418600 TIMM10P62072 90 aa19.39■□□□□ 0.69
SYNGAP1-202ENST00000418600 STX6O43752 255 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 DKC1O60832 514 aaKnown RBP eCLIP19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 GIGYF1O75420 1035 aaPredicted RBP19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 DNM2P50570 870 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 CBFA2T2O43439 604 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 PRC1O43663 620 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 CALML3P27482 149 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 GYG1P46976 350 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 ANKRD35Q8N283 1001 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 VAMP4O75379 141 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 USH1GQ495M9 461 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 TCERG1LQ5VWI1 586 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 PNMA3Q9UL41 463 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 GRAPQ13588 217 aa19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 GRAPLQ8TC17 118 aaPredicted RBP19.38■□□□□ 0.69
SYNGAP1-202ENST00000418600 SUCLG2Q96I99 432 aa19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 MBD3O95983 291 aa19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 CERKLQ49MI3 558 aaPredicted RBP19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 HELLSQ9NRZ9 838 aa19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 NEURL1BA8MQ27 555 aa19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 KCNQ3O43525 872 aa19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 HACE1Q8IYU2 909 aa19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 UPF3BQ9BZI7 483 aaKnown RBP19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 HACL1Q9UJ83 578 aa19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 PRPF40AO75400 957 aaKnown RBP19.37■□□□□ 0.69
SYNGAP1-202ENST00000418600 CARMIL3Q8ND23 1372 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 FAM13AO94988 1023 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 IMPG2Q9BZV3 1241 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 ANGEL1Q9UNK9 670 aaKnown RBP19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 MLXIPQ9HAP2 919 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 NR1I2O75469 434 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 CCDC40Q4G0X9 1142 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 ARHGEF16Q5VV41 709 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 ANKRD44Q8N8A2 993 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 SYNCQ9H7C4 482 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 BCAMP50895 628 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 G2E3Q7L622 706 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 NLRX1Q86UT6 975 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 PDE4DQ08499 809 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 TBC1D10BQ4KMP7 808 aaPredicted RBP19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 TRIM5Q9C035 493 aa19.36■□□□□ 0.69
SYNGAP1-202ENST00000418600 FLOT1O75955 427 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 USP8P40818 1118 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 FNBP4Q8N3X1 1017 aaPredicted RBP19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 CSRNP1Q96S65 589 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 ERVV-1B6SEH8 477 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 KRT13P13646 458 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 GLT8D2Q9H1C3 349 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 PNMA2Q9UL42 364 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 C1orf167Q5SNV9 1468 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 CALRP27797 417 aaKnown RBP19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 NFKBIBQ15653 356 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 MMRN2Q9H8L6 949 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 ZNF277Q9NRM2 450 aaPredicted RBP19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 SPATA31A1Q5TZJ5 1347 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 TTC22Q5TAA0 569 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 VPS36Q86VN1 386 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 NARFQ9UHQ1 456 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 LIMCH1Q9UPQ0 1083 aa19.35■□□□□ 0.69
SYNGAP1-202ENST00000418600 ANAPC15P60006 121 aa19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 GNPTABQ3T906 1256 aa19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 ARPP21Q9UBL0 812 aaPredicted RBP19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 KIF24Q5T7B8 1368 aa19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 ZKSCAN3Q9BRR0 538 aa19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 EXOC1Q9NV70 894 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms