RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 STX6O43752 255 aa19.85■□□□□ 0.77
SSBP3-205ENST00000417664 CYP7A1P22680 504 aa19.85■□□□□ 0.77
SSBP3-205ENST00000417664 ATP2B4P23634 1241 aa19.85■□□□□ 0.77
SSBP3-205ENST00000417664 EVCP57679 992 aa19.85■□□□□ 0.77
SSBP3-205ENST00000417664 BRF1Q92994 677 aa19.85■□□□□ 0.77
SSBP3-205ENST00000417664 ZNF274Q96GC6 653 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-205ENST00000417664 LLPHQ9BRT6 129 aaKnown RBP19.85■□□□□ 0.77
SSBP3-205ENST00000417664 RGS17Q9UGC6 210 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-205ENST00000417664 IQSEC3Q9UPP2 1182 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-205ENST00000417664 NRXN2Q9P2S2 1712 aa19.85■□□□□ 0.77
SSBP3-205ENST00000417664 SYT1P21579 422 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 SPTY2D1Q68D10 685 aaPredicted RBP19.84■□□□□ 0.77
SSBP3-205ENST00000417664 MB21D2Q8IYB1 491 aaPredicted RBP19.84■□□□□ 0.77
SSBP3-205ENST00000417664 IFNL3Q8IZI9 196 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 NECAB1Q8N987 351 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 NAPBQ9H115 298 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 PODXL2Q9NZ53 605 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 ATP6V1DQ9Y5K8 247 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 SALL1Q9NSC2 1324 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 A0A0G2JLW4 131 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 PFKFB2O60825 505 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 HAND2P61296 217 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 ZNF804AQ7Z570 1209 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 ARMT1Q9H993 441 aa19.84■□□□□ 0.77
SSBP3-205ENST00000417664 MYH13Q9UKX3 1938 aa19.83■□□□□ 0.77
SSBP3-205ENST00000417664 GSG1L2A8MUP6 293 aa19.83■□□□□ 0.76
SSBP3-205ENST00000417664 ZSCAN22P10073 491 aaPredicted RBP19.83■□□□□ 0.76
SSBP3-205ENST00000417664 KLRK1P26718 216 aa19.83■□□□□ 0.76
SSBP3-205ENST00000417664 NAA16Q6N069 864 aaPredicted RBP19.83■□□□□ 0.76
SSBP3-205ENST00000417664 WDR66Q8TBY9 1149 aa19.83■□□□□ 0.76
SSBP3-205ENST00000417664 MAGEB6P1A0A0J9YX57 407 aa19.82■□□□□ 0.76
SSBP3-205ENST00000417664 MCTP1Q6DN14 999 aa19.82■□□□□ 0.76
SSBP3-205ENST00000417664 POTEAQ6S8J7 498 aa19.82■□□□□ 0.76
SSBP3-205ENST00000417664 CNNM2Q9H8M5 875 aa19.82■□□□□ 0.76
SSBP3-205ENST00000417664 SLC4A4Q9Y6R1 1079 aa19.82■□□□□ 0.76
SSBP3-205ENST00000417664 CACNA1SQ13698 1873 aa19.82■□□□□ 0.76
SSBP3-205ENST00000417664 LCORLQ8N3X6 602 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 TDRD7Q8NHU6 1098 aaKnown RBP19.81■□□□□ 0.76
SSBP3-205ENST00000417664 FBXO41Q8TF61 875 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 EPB41L4AQ9HCS5 686 aaPredicted RBP19.81■□□□□ 0.76
SSBP3-205ENST00000417664 GGA1Q9UJY5 639 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 PARP3Q9Y6F1 533 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 PRC1O43663 620 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 PDE6BP35913 854 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 GIMAP6Q6P9H5 292 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 NSUN4Q96CB9 384 aaKnown RBP19.81■□□□□ 0.76
SSBP3-205ENST00000417664 KIF3AQ9Y496 699 aa19.81■□□□□ 0.76
SSBP3-205ENST00000417664 DEKP35659 375 aaKnown RBP19.8■□□□□ 0.76
SSBP3-205ENST00000417664 GPSM2P81274 684 aa19.8■□□□□ 0.76
SSBP3-205ENST00000417664 TXNRD3Q86VQ6 643 aa19.8■□□□□ 0.76
SSBP3-205ENST00000417664 SP8Q8IXZ3 490 aa19.8■□□□□ 0.76
SSBP3-205ENST00000417664 RIOK1Q9BRS2 568 aaKnown RBP19.8■□□□□ 0.76
SSBP3-205ENST00000417664 LRRC2Q9BYS8 371 aa19.8■□□□□ 0.76
SSBP3-205ENST00000417664 NBPF3Q9H094 633 aa19.8■□□□□ 0.76
SSBP3-205ENST00000417664 NSFL1CQ9UNZ2 370 aaKnown RBP19.8■□□□□ 0.76
SSBP3-205ENST00000417664 DUOX1Q9NRD9 1551 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 NPR1P16066 1061 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 ALDH1B1P30837 517 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 TDO2P48775 406 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 HMGN5P82970 282 aaKnown RBP19.79■□□□□ 0.76
SSBP3-205ENST00000417664 STK3Q13188 491 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 KLHL40Q2TBA0 621 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 LARP1BQ659C4 914 aaKnown RBP19.79■□□□□ 0.76
SSBP3-205ENST00000417664 MIGA1Q8NAN2 632 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 TMEM87BQ96K49 555 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 MTA3Q9BTC8 594 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 KRT23Q9C075 422 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 RNF41Q9H4P4 317 aaPredicted RBP19.79■□□□□ 0.76
SSBP3-205ENST00000417664 TIAM2Q8IVF5 1701 aa19.79■□□□□ 0.76
SSBP3-205ENST00000417664 UFL1O94874 794 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 F13A1P00488 732 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 APOBRQ0VD83 1088 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 SCRN1Q12765 414 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 TBC1D10CQ8IV04 446 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 SMARCC2Q8TAQ2 1214 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 LMBRD1Q9NUN5 540 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 MAST2Q6P0Q8 1798 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 LRRC37AA6NMS7 1700 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 DHX16O60231 1041 aaKnown RBP19.78■□□□□ 0.76
SSBP3-205ENST00000417664 MMP10P09238 476 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 SRGNP10124 158 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 PDIA3P30101 505 aaKnown RBP19.78■□□□□ 0.76
SSBP3-205ENST00000417664 MECOMQ03112 1051 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 AKNAD1Q5T1N1 836 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 ADGRA1Q86SQ6 560 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 STAG1Q8WVM7 1258 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 CAMKK2Q96RR4 588 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 ANAPC4Q9UJX5 808 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 MTMR6Q9Y217 621 aa19.78■□□□□ 0.76
SSBP3-205ENST00000417664 PPEF1O14829 653 aaPredicted RBP19.77■□□□□ 0.76
SSBP3-205ENST00000417664 ANTXR2P58335 489 aa19.77■□□□□ 0.76
SSBP3-205ENST00000417664 CHAF1AQ13111 956 aaPredicted RBP19.77■□□□□ 0.76
SSBP3-205ENST00000417664 ATP6V0A2Q9Y487 856 aa19.77■□□□□ 0.76
SSBP3-205ENST00000417664 CCDC88AQ3V6T2 1871 aa19.77■□□□□ 0.76
SSBP3-205ENST00000417664 ANKRD31Q8N7Z5 1873 aa19.77■□□□□ 0.76
SSBP3-205ENST00000417664 PRKAB2O43741 272 aa19.76■□□□□ 0.75
SSBP3-205ENST00000417664 PCP11498 1178 aaKnown RBP19.76■□□□□ 0.75
SSBP3-205ENST00000417664 IL1R1P14778 569 aa19.76■□□□□ 0.75
SSBP3-205ENST00000417664 GSTO1P78417 241 aa19.76■□□□□ 0.75
SSBP3-205ENST00000417664 FOXD4L5Q5VV16 416 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms