RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 CARMIL1Q5VZK9 1371 aa4.61□□□□□ -1.67
LINC01349-201ENST00000416343 DENND4BO75064 1496 aaPredicted RBP4.61□□□□□ -1.67
LINC01349-201ENST00000416343 FGD5Q6ZNL6 1462 aa4.61□□□□□ -1.67
LINC01349-201ENST00000416343 E9PSI1 815 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 TULP2O00295 520 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 LGR5O75473 907 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 SASH3O75995 380 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 TPM3P06753 285 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 NUCB2P80303 420 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 CHAF1AQ13111 956 aaPredicted RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 DGKZQ13574 1117 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 UVSSAQ2YD98 709 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 CTR9Q6PD62 1173 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 LARP1Q6PKG0 1096 aaKnown RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 ZNF771Q7L3S4 317 aaPredicted RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 ANKMY2Q8IV38 441 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 ANKRD7Q92527 254 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 HINFPQ9BQA5 517 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 PPP1R12CQ9BZL4 782 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 SMG9Q9H0W8 520 aaKnown RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 SPTLC3Q9NUV7 552 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 GEMIN8Q9NWZ8 242 aaKnown RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 CGNQ9P2M7 1197 aaKnown RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 LRFN2Q9ULH4 789 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 RTCBQ9Y3I0 505 aaKnown RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 DDX49Q9Y6V7 483 aaKnown RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 TCOF1Q13428 1488 aaKnown RBP4.6□□□□□ -1.67
LINC01349-201ENST00000416343 BIVM-ERCC5R4GMW8 1640 aa4.6□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L15C9J2P7 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L10C9JJH3 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L13C9JLJ4 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L12C9JPN9 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L11C9JVI0 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L21D6R901 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L18D6R9N7 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L22D6RA61 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L17D6RBQ6 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L19D6RCP7 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L20D6RJB6 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 F8W735 103 aaPredicted RBP4.59□□□□□ -1.67
LINC01349-201ENST00000416343 CTIFO43310 598 aaKnown RBP4.59□□□□□ -1.67
LINC01349-201ENST00000416343 PAX4O43316 350 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 FOXO3O43524 673 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 RARAP10276 462 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 KCNJ4P48050 445 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 MLLT1Q03111 559 aaPredicted RBP4.59□□□□□ -1.67
LINC01349-201ENST00000416343 KRTAP1-1Q07627 177 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 USP17L24Q0WX57 530 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 GAPVD1Q14C86 1478 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 ATP2B3Q16720 1220 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 C11orf91Q3C1V1 193 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 ZSCAN23Q3MJ62 389 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 KRT25Q7Z3Z0 450 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 FAM184AQ8NB25 1140 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 CFAP43Q8NDM7 1665 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 PIBF1Q8WXW3 757 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 AKTIPQ9H8T0 292 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 CWC22Q9HCG8 908 aaKnown RBP4.59□□□□□ -1.67
LINC01349-201ENST00000416343 RRP7BPQ9NSQ0 103 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 MBD5Q9P267 1494 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 NPC1L1Q9UHC9 1359 aa4.59□□□□□ -1.67
LINC01349-201ENST00000416343 HECW1Q76N89 1606 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 EFCAB5A4FU69 1503 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 CAMSAP2Q08AD1 1489 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 KIF16BQ96L93 1317 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 TM4SF5O14894 197 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 BAG4O95429 457 aaKnown RBP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 MBD3O95983 291 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 FSTP19883 344 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 SOX18P35713 384 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 CD97P48960 835 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 MFAP1P55081 439 aaKnown RBP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 NOLC1Q14978 699 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 SETDB1Q15047 1291 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 WDR43Q15061 677 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 MCTP1Q6DN14 999 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 LRSAM1Q6UWE0 723 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 SECISBP2LQ93073 1101 aaKnown RBP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 ZNF622Q969S3 477 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 POLR3GLQ9BT43 218 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 CARD11Q9BXL7 1154 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 RBSNQ9H1K0 784 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 SRA1Q9HD15 236 aaKnown RBP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 KCNMB2Q9Y691 235 aa4.58□□□□□ -1.68
LINC01349-201ENST00000416343 MORC2Q9Y6X9 1032 aaPredicted RBP4.58□□□□□ -1.68
LINC01349-201ENST00000416343 NKTRP30414 1462 aaKnown RBP4.57□□□□□ -1.68
LINC01349-201ENST00000416343 RALGAPBQ86X10 1494 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 COL17A1Q9UMD9 1497 aaPredicted RBP4.57□□□□□ -1.68
LINC01349-201ENST00000416343 LOC102724428A0A0B4J2F2 783 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 VGLL3A8MV65 326 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 ALX3O95076 343 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 PTMAP06454 111 aaKnown RBP4.57□□□□□ -1.68
LINC01349-201ENST00000416343 SLFN14P0C7P3 912 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 SIK1P57059 783 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 FKBP5Q13451 457 aaPredicted RBP4.57□□□□□ -1.68
LINC01349-201ENST00000416343 CDCA8Q53HL2 280 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 HFE2Q6ZVN8 426 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 PROSER2Q86WR7 435 aaPredicted RBP4.57□□□□□ -1.68
LINC01349-201ENST00000416343 MAP4K3Q8IVH8 894 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 PLD4Q96BZ4 506 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms