RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 FOCADQ5VW36 1801 aa10.11□□□□□ -0.79
RBM39-208ENST00000416108 MYH1P12882 1939 aa10.11□□□□□ -0.79
RBM39-208ENST00000416108 BAZ2AQ9UIF9 1905 aaKnown RBP10.11□□□□□ -0.79
RBM39-208ENST00000416108 MYO3BQ8WXR4 1341 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 ZNF532Q9HCE3 1301 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 LAMA4Q16363 1823 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 MYH8P13535 1937 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 USP17L3A6NCW0 530 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 USP17L4A6NCW7 530 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 CYP7A1P22680 504 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 MCCP23508 829 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
RBM39-208ENST00000416108 FKBP1AP62942 108 aaKnown RBP10.1□□□□□ -0.79
RBM39-208ENST00000416108 ZMYM1Q5SVZ6 1142 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 STRIP1Q5VSL9 837 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 USP17L1Q7RTZ2 530 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 FAM227BQ96M60 508 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 LAMB1P07942 1786 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 ADAMTSL1Q8N6G6 1762 aa10.1□□□□□ -0.79
RBM39-208ENST00000416108 CCDC171Q6TFL3 1326 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 A0A0D9SFI3 127 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 SGSM2O43147 1006 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 GRIN3BO60391 1043 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 LMNB1P20700 586 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 PRDX5P30044 214 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 MECOMQ03112 1051 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 TNIP1Q15025 636 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 CIAPIN1Q6FI81 312 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 AIDAQ96BJ3 306 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 COL4A5P29400 1685 aa10.09□□□□□ -0.79
RBM39-208ENST00000416108 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
RBM39-208ENST00000416108 F8W031 263 aaPredicted RBP10.08□□□□□ -0.8
RBM39-208ENST00000416108 RAD17O75943 681 aa10.08□□□□□ -0.8
RBM39-208ENST00000416108 BAG3O95817 575 aa10.08□□□□□ -0.8
RBM39-208ENST00000416108 DACT2Q5SW24 774 aa10.08□□□□□ -0.8
RBM39-208ENST00000416108 CERS3Q8IU89 383 aa10.08□□□□□ -0.8
RBM39-208ENST00000416108 NSUN4Q96CB9 384 aaKnown RBP10.08□□□□□ -0.8
RBM39-208ENST00000416108 HDAC9Q9UKV0 1011 aa10.08□□□□□ -0.8
RBM39-208ENST00000416108 TTF2Q9UNY4 1162 aaKnown RBP10.08□□□□□ -0.8
RBM39-208ENST00000416108 YDJCA8MPS7 323 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 M0R2C6 588 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 GPAA1O43292 621 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 EPB41L2O43491 1005 aaKnown RBP10.07□□□□□ -0.8
RBM39-208ENST00000416108 YBX3P16989 372 aaKnown RBP eCLIP10.07□□□□□ -0.8
RBM39-208ENST00000416108 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
RBM39-208ENST00000416108 CCDC129Q6ZRS4 1044 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 KIAA0825Q8IV33 1275 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 SEC62Q99442 399 aaKnown RBP10.07□□□□□ -0.8
RBM39-208ENST00000416108 RNF181Q9P0P0 153 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 MROH7-TTC4A0A0A0MT08 1334 aa10.07□□□□□ -0.8
RBM39-208ENST00000416108 TCRBV5S4A2TA0A5A2 114 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 PSMD14O00487 310 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 MBD4O95243 580 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 PLCG2P16885 1265 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 GNAT2P19087 354 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 RBM5P52756 815 aaKnown RBP eCLIP10.06□□□□□ -0.8
RBM39-208ENST00000416108 SLFNL1Q499Z3 407 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 MIGA1Q8NAN2 632 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 OSBP2Q969R2 916 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 MXD3Q9BW11 206 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 NACAP1Q9BZK3 213 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 PUS7LQ9H0K6 701 aaKnown RBP10.06□□□□□ -0.8
RBM39-208ENST00000416108 KCNQ5Q9NR82 932 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 GJA3Q9Y6H8 435 aa10.06□□□□□ -0.8
RBM39-208ENST00000416108 SEC24BO95487 1268 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 CHGBP05060 677 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 APPP05067 770 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 VIL1P09327 827 aaKnown RBP10.05□□□□□ -0.8
RBM39-208ENST00000416108 SCNN1DP51172 638 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 CXCL9Q07325 125 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 ZNF589Q86UQ0 364 aaPredicted RBP10.05□□□□□ -0.8
RBM39-208ENST00000416108 CERS5Q8N5B7 392 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 AGBL3Q8NEM8 1001 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 DSCC1Q9BVC3 393 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 CRNKL1Q9BZJ0 848 aaKnown RBP10.05□□□□□ -0.8
RBM39-208ENST00000416108 ARMT1Q9H993 441 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 AATFQ9NY61 560 aaKnown RBP eCLIP10.05□□□□□ -0.8
RBM39-208ENST00000416108 CTNNA3Q9UI47 895 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
RBM39-208ENST00000416108 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
RBM39-208ENST00000416108 RPAP1Q9BWH6 1393 aaPredicted RBP10.04□□□□□ -0.8
RBM39-208ENST00000416108 FZD9O00144 591 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 RPS12P25398 132 aaKnown RBP10.04□□□□□ -0.8
RBM39-208ENST00000416108 BTDP43251 543 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 USP5P45974 858 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 CRKP46108 304 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 TDO2P48775 406 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 HDLBPQ00341 1268 aaKnown RBP10.04□□□□□ -0.8
RBM39-208ENST00000416108 GRIK5Q16478 980 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 HHIPL2Q6UWX4 724 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 AMOTL1Q8IY63 956 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 LCORLQ8N3X6 602 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms