RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 BCL7CQ8WUZ0 217 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 EDEM1Q92611 657 aa6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 AP4E1Q9UPM8 1137 aa6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 AAMPQ13685 434 aa6.64□□□□□ -1.35
TRAPPC13-203ENST00000415825 AKAP4Q5JQC9 854 aa6.64□□□□□ -1.35
TRAPPC13-203ENST00000415825 CFAP70Q5T0N1 1121 aa6.64□□□□□ -1.35
TRAPPC13-203ENST00000415825 HGSNATQ68CP4 663 aa6.64□□□□□ -1.35
TRAPPC13-203ENST00000415825 VN1R5Q7Z5H4 357 aa6.64□□□□□ -1.35
TRAPPC13-203ENST00000415825 PI4K2BQ8TCG2 481 aa6.64□□□□□ -1.35
TRAPPC13-203ENST00000415825 ZBTB39O15060 712 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 ESRRAP11474 423 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 ASPAP45381 313 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 TMEM132AQ24JP5 1023 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 NFXL1Q6ZNB6 911 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 SHISA5Q8N114 240 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 TOX2Q96NM4 488 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 HHIPQ96QV1 700 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 ZKSCAN3Q9BRR0 538 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 DAGLAQ9Y4D2 1042 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 ACTL7BQ9Y614 415 aa6.63□□□□□ -1.35
TRAPPC13-203ENST00000415825 EHHADHQ08426 723 aa6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 COL19A1Q14993 1142 aa6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 NOM1Q5C9Z4 860 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 OGFOD3Q6PK18 319 aa6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 ATCAYQ86WG3 371 aa6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 ZSCAN18Q8TBC5 510 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 FAM84AQ96KN4 292 aa6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 CORO1BQ9BR76 489 aa6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 FAM53CQ9NYF3 392 aa6.62□□□□□ -1.35
TRAPPC13-203ENST00000415825 MZF1P28698 734 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 POU4F3Q15319 338 aa6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 ALKBH2Q6NS38 261 aa6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 ZNF574Q6ZN55 896 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 NETO1Q8TDF5 533 aa6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 SNX29Q8TEQ0 813 aa6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 SEMA6CQ9H3T2 930 aa6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 ZNF777Q9ULD5 760 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-203ENST00000415825 DLGAP3O95886 979 aa6.6□□□□□ -1.35
TRAPPC13-203ENST00000415825 MAOBP27338 520 aa6.6□□□□□ -1.35
TRAPPC13-203ENST00000415825 CAPN12Q6ZSI9 719 aa6.6□□□□□ -1.35
TRAPPC13-203ENST00000415825 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
TRAPPC13-203ENST00000415825 BHLHE41Q9C0J9 482 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-203ENST00000415825 PIDD1Q9HB75 910 aa6.6□□□□□ -1.35
TRAPPC13-203ENST00000415825 LRRC10BA6NIK2 292 aa6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 PDGFAP04085 211 aa6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 USP5P45974 858 aa6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 RAP1GAPP47736 663 aa6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 BHLHE22Q8NFJ8 381 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 GATA6Q92908 595 aa6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 PPP1R16BQ96T49 567 aa6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 AMOTL2Q9Y2J4 779 aa6.59□□□□□ -1.35
TRAPPC13-203ENST00000415825 EREGO14944 169 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 FUT4P22083 530 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 PCDH1Q08174 1060 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 CLP1Q92989 425 aaKnown RBP6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 KRTAP4-2Q9BYR5 136 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 CLEC4MQ9H2X3 399 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 ACSS3Q9H6R3 686 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 FAM105AQ9NUU6 356 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 VAV3Q9UKW4 847 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 ZMIZ1Q9ULJ6 1067 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 CARMIL2Q6F5E8 1435 aa6.58□□□□□ -1.36
TRAPPC13-203ENST00000415825 BNIP3Q12983 259 aa6.57□□□□□ -1.36
TRAPPC13-203ENST00000415825 ANGEL2Q5VTE6 544 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-203ENST00000415825 SPRED2Q7Z698 418 aa6.57□□□□□ -1.36
TRAPPC13-203ENST00000415825 HELQQ8TDG4 1101 aa6.57□□□□□ -1.36
TRAPPC13-203ENST00000415825 HRASLS5Q96KN8 279 aa6.57□□□□□ -1.36
TRAPPC13-203ENST00000415825 GGNBP2Q9H3C7 697 aa6.57□□□□□ -1.36
TRAPPC13-203ENST00000415825 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
TRAPPC13-203ENST00000415825 A6NHS1 94 aa6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 PRKCSHP14314 528 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 ATP2B4P23634 1241 aa6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 PRKCQQ04759 706 aa6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 FAM69CQ0P6D2 419 aa6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 GLIS3Q8NEA6 775 aa6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 CHRDQ9H2X0 955 aa6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC13-203ENST00000415825 TNFRSF21O75509 655 aa6.55□□□□□ -1.36
TRAPPC13-203ENST00000415825 RNASE1P07998 156 aaKnown RBP6.55□□□□□ -1.36
TRAPPC13-203ENST00000415825 CD8BP10966 210 aa6.55□□□□□ -1.36
TRAPPC13-203ENST00000415825 KCNMB1Q16558 191 aa6.55□□□□□ -1.36
TRAPPC13-203ENST00000415825 IFI16Q16666 785 aaKnown RBP6.55□□□□□ -1.36
TRAPPC13-203ENST00000415825 TMEM265A0A087WTH1 108 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 A0A096LPE4 126 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 A0A1W2PPZ6 126 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 SLFN14P0C7P3 912 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 FAM87AP0C7U9 286 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 EIF1AXP47813 144 aaKnown RBP6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 AOC3Q16853 763 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 TMEM164Q5U3C3 297 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 ZSWIM9Q86XI8 627 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 ANKLE2Q86XL3 938 aa6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 PLD6Q8N2A8 252 aaKnown RBP6.54□□□□□ -1.36
TRAPPC13-203ENST00000415825 ATG7O95352 703 aa6.53□□□□□ -1.36
TRAPPC13-203ENST00000415825 MLANAQ16655 118 aa6.53□□□□□ -1.36
TRAPPC13-203ENST00000415825 LRRN4CLQ8ND94 238 aa6.53□□□□□ -1.36
TRAPPC13-203ENST00000415825 ATXN3LQ9H3M9 355 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms