RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 CLP1Q92989 425 aaKnown RBP5.04□□□□□ -1.6
LINC00428-201ENST00000415620 NUDT16Q96DE0 195 aaKnown RBP5.04□□□□□ -1.6
LINC00428-201ENST00000415620 HHIPQ96QV1 700 aa5.04□□□□□ -1.6
LINC00428-201ENST00000415620 CHRDQ9H2X0 955 aa5.04□□□□□ -1.6
LINC00428-201ENST00000415620 LRRC4CQ9HCJ2 640 aa5.04□□□□□ -1.6
LINC00428-201ENST00000415620 ZC3H7BQ9UGR2 993 aaKnown RBP5.04□□□□□ -1.6
LINC00428-201ENST00000415620 LOC100289279A0A1B0GTE1 492 aa5.03□□□□□ -1.6
LINC00428-201ENST00000415620 SOX1O00570 391 aaPredicted RBP5.03□□□□□ -1.6
LINC00428-201ENST00000415620 ZNF438Q7Z4V0 828 aa5.03□□□□□ -1.6
LINC00428-201ENST00000415620 VN1R5Q7Z5H4 357 aa5.03□□□□□ -1.6
LINC00428-201ENST00000415620 C1orf127Q8N9H9 656 aa5.03□□□□□ -1.6
LINC00428-201ENST00000415620 C2CD4AQ8NCU7 369 aaPredicted RBP5.03□□□□□ -1.6
LINC00428-201ENST00000415620 SLC38A3Q99624 504 aa5.03□□□□□ -1.6
LINC00428-201ENST00000415620 SLAIN2Q9P270 581 aa5.03□□□□□ -1.6
LINC00428-201ENST00000415620 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.03□□□□□ -1.6
LINC00428-201ENST00000415620 SPATA31D1Q6ZQQ2 1576 aa5.03□□□□□ -1.6
LINC00428-201ENST00000415620 MRC2Q9UBG0 1479 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 EIF4EBP3O60516 100 aaPredicted RBP5.02□□□□□ -1.61
LINC00428-201ENST00000415620 ATG7O95352 703 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 RPLP1P05386 114 aaKnown RBP5.02□□□□□ -1.61
LINC00428-201ENST00000415620 CES1P23141 567 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 SOX4Q06945 474 aaPredicted RBP5.02□□□□□ -1.61
LINC00428-201ENST00000415620 MAP7Q14244 749 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 ZNF792Q3KQV3 632 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 ATG4DQ86TL0 474 aaPredicted RBP5.02□□□□□ -1.61
LINC00428-201ENST00000415620 STK11IPQ8N1F8 1099 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 BCL7CQ8WUZ0 217 aaPredicted RBP5.02□□□□□ -1.61
LINC00428-201ENST00000415620 BSNDQ8WZ55 320 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 SOX17Q9H6I2 414 aaPredicted RBP5.02□□□□□ -1.61
LINC00428-201ENST00000415620 CARMIL2Q6F5E8 1435 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 CHD1O14646 1710 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 KIF13AQ9H1H9 1805 aa5.02□□□□□ -1.61
LINC00428-201ENST00000415620 NCAPD3P42695 1498 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 TRPA1O75762 1119 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 DLGAP3O95886 979 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 TMEM164Q5U3C3 297 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 ATCAYQ86WG3 371 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 TMEM40Q8WWA1 233 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 GATA6Q92908 595 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 PMEPA1Q969W9 287 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 NXPE3Q969Y0 559 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
LINC00428-201ENST00000415620 TMEM132AQ24JP5 1023 aa5□□□□□ -1.61
LINC00428-201ENST00000415620 CCER1Q8TC90 406 aaPredicted RBP5□□□□□ -1.61
LINC00428-201ENST00000415620 FAM168AQ92567 244 aa5□□□□□ -1.61
LINC00428-201ENST00000415620 GGNBP2Q9H3C7 697 aa5□□□□□ -1.61
LINC00428-201ENST00000415620 ZNF777Q9ULD5 760 aaPredicted RBP5□□□□□ -1.61
LINC00428-201ENST00000415620 NFICP08651 508 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 ZNF765Q7L2R6 523 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 TTC16Q8NEE8 873 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 EDEM1Q92611 657 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 MISP3Q96FF7 219 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 ZKSCAN3Q9BRR0 538 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 BHLHE41Q9C0J9 482 aaPredicted RBP4.99□□□□□ -1.61
LINC00428-201ENST00000415620 NRSN2Q9GZP1 204 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 SEPT3Q9UH03 358 aa4.99□□□□□ -1.61
LINC00428-201ENST00000415620 PDGFAP04085 211 aa4.98□□□□□ -1.61
LINC00428-201ENST00000415620 ESRRAP11474 423 aaPredicted RBP4.98□□□□□ -1.61
LINC00428-201ENST00000415620 PCSK2P16519 638 aa4.98□□□□□ -1.61
LINC00428-201ENST00000415620 GSTM4Q03013 218 aa4.98□□□□□ -1.61
LINC00428-201ENST00000415620 ZNF574Q6ZN55 896 aaPredicted RBP4.98□□□□□ -1.61
LINC00428-201ENST00000415620 HELQQ8TDG4 1101 aa4.98□□□□□ -1.61
LINC00428-201ENST00000415620 OSMRQ99650 979 aa4.98□□□□□ -1.61
LINC00428-201ENST00000415620 PDS5BQ9NTI5 1447 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 SYNJ2O15056 1496 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.97□□□□□ -1.61
LINC00428-201ENST00000415620 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.97□□□□□ -1.61
LINC00428-201ENST00000415620 A6NHS1 94 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 ADH5P11766 374 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 RAB6AP20340 208 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 MZF1P28698 734 aaPredicted RBP4.97□□□□□ -1.61
LINC00428-201ENST00000415620 HP1BP3Q5SSJ5 553 aaPredicted RBP4.97□□□□□ -1.61
LINC00428-201ENST00000415620 SPRED2Q7Z698 418 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 WFDC3Q8IUB2 231 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 GLIS3Q8NEA6 775 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 BHLHE22Q8NFJ8 381 aaPredicted RBP4.97□□□□□ -1.61
LINC00428-201ENST00000415620 FAM84AQ96KN4 292 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 RC3H2Q9HBD1 1191 aaKnown RBP4.97□□□□□ -1.61
LINC00428-201ENST00000415620 ACTL7BQ9Y614 415 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 HMGXB3Q12766 1538 aa4.97□□□□□ -1.61
LINC00428-201ENST00000415620 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 EREGO14944 169 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 FUT4P22083 530 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 BNIP3Q12983 259 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 CYP27C1Q4G0S4 372 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 OGFOD3Q6PK18 319 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 DYMQ7RTS9 669 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 ASAP3Q8TDY4 903 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 SEMA6CQ9H3T2 930 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 ZFYVE1Q9HBF4 777 aa4.96□□□□□ -1.62
LINC00428-201ENST00000415620 TNFRSF21O75509 655 aa4.95□□□□□ -1.62
LINC00428-201ENST00000415620 ZNF865P0CJ78 1059 aaPredicted RBP4.95□□□□□ -1.62
LINC00428-201ENST00000415620 DNM1Q05193 864 aaKnown RBP4.95□□□□□ -1.62
LINC00428-201ENST00000415620 NOM1Q5C9Z4 860 aaKnown RBP4.95□□□□□ -1.62
LINC00428-201ENST00000415620 PEAR1Q5VY43 1037 aaPredicted RBP4.95□□□□□ -1.62
LINC00428-201ENST00000415620 PI4K2BQ8TCG2 481 aa4.95□□□□□ -1.62
LINC00428-201ENST00000415620 TOX2Q96NM4 488 aa4.95□□□□□ -1.62
LINC00428-201ENST00000415620 ACSS3Q9H6R3 686 aa4.95□□□□□ -1.62
LINC00428-201ENST00000415620 RNASE1P07998 156 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms