RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 SUGT1Q9Y2Z0 365 aa13.45□□□□□ -0.26
LMCD1-203ENST00000415597 UBTFL1P0CB47 393 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-203ENST00000415597 ARHGEF6Q15052 776 aa13.44□□□□□ -0.26
LMCD1-203ENST00000415597 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
LMCD1-203ENST00000415597 WNK4Q96J92 1243 aa13.44□□□□□ -0.26
LMCD1-203ENST00000415597 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
LMCD1-203ENST00000415597 CFHR5Q9BXR6 569 aa13.44□□□□□ -0.26
LMCD1-203ENST00000415597 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
LMCD1-203ENST00000415597 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-203ENST00000415597 CSADQ9Y600 493 aa13.44□□□□□ -0.26
LMCD1-203ENST00000415597 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 EYA2O00167 538 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
LMCD1-203ENST00000415597 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 WDR66Q8TBY9 1149 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 LPIN2Q92539 896 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 CEP126Q9P2H0 1117 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 PCDHAC2Q9Y5I4 1007 aa13.43□□□□□ -0.26
LMCD1-203ENST00000415597 KIF16BQ96L93 1317 aa13.42□□□□□ -0.26
LMCD1-203ENST00000415597 BCAMP50895 628 aa13.42□□□□□ -0.26
LMCD1-203ENST00000415597 FBXO46Q6PJ61 603 aaPredicted RBP13.42□□□□□ -0.26
LMCD1-203ENST00000415597 ERO1AQ96HE7 468 aa13.42□□□□□ -0.26
LMCD1-203ENST00000415597 FZD1Q9UP38 647 aa13.42□□□□□ -0.26
LMCD1-203ENST00000415597 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
LMCD1-203ENST00000415597 SOX10P56693 466 aa13.41□□□□□ -0.26
LMCD1-203ENST00000415597 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
LMCD1-203ENST00000415597 DCAF15Q66K64 600 aa13.41□□□□□ -0.26
LMCD1-203ENST00000415597 KLHDC4Q8TBB5 520 aa13.41□□□□□ -0.26
LMCD1-203ENST00000415597 CLMNQ96JQ2 1002 aa13.41□□□□□ -0.26
LMCD1-203ENST00000415597 GTF2A2P52657 109 aa13.4□□□□□ -0.26
LMCD1-203ENST00000415597 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
LMCD1-203ENST00000415597 OPTNQ96CV9 577 aa13.4□□□□□ -0.26
LMCD1-203ENST00000415597 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
LMCD1-203ENST00000415597 ELP3Q9H9T3 547 aa13.4□□□□□ -0.26
LMCD1-203ENST00000415597 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
LMCD1-203ENST00000415597 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
LMCD1-203ENST00000415597 CIAO1O76071 339 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 FKBP1CQ5VVH2 108 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 FAM83AQ86UY5 434 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 VGLL2Q8N8G2 317 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 CDCA7LQ96GN5 454 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 TMEM39BQ9GZU3 492 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 TRIM17Q9Y577 477 aa13.39□□□□□ -0.27
LMCD1-203ENST00000415597 GNAI3P08754 354 aa13.38□□□□□ -0.27
LMCD1-203ENST00000415597 FGFR2P21802 821 aa13.38□□□□□ -0.27
LMCD1-203ENST00000415597 IL15P40933 162 aaPredicted RBP13.38□□□□□ -0.27
LMCD1-203ENST00000415597 ATP2B3Q16720 1220 aa13.38□□□□□ -0.27
LMCD1-203ENST00000415597 INTS3Q68E01 1043 aaKnown RBP13.38□□□□□ -0.27
LMCD1-203ENST00000415597 ZGPATQ8N5A5 531 aaKnown RBP13.38□□□□□ -0.27
LMCD1-203ENST00000415597 SIL1Q9H173 461 aa13.38□□□□□ -0.27
LMCD1-203ENST00000415597 ZFYVE28Q9HCC9 887 aa13.38□□□□□ -0.27
LMCD1-203ENST00000415597 DENND2AQ9ULE3 1009 aa13.38□□□□□ -0.27
LMCD1-203ENST00000415597 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
LMCD1-203ENST00000415597 IGF2BP3O00425 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
LMCD1-203ENST00000415597 SEMA3EO15041 775 aa13.37□□□□□ -0.27
LMCD1-203ENST00000415597 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
LMCD1-203ENST00000415597 SP3Q02447 781 aa13.37□□□□□ -0.27
LMCD1-203ENST00000415597 SLF2Q8IX21 1173 aa13.37□□□□□ -0.27
LMCD1-203ENST00000415597 ARHGAP45Q92619 1136 aa13.37□□□□□ -0.27
LMCD1-203ENST00000415597 CCL15-CCL14A0A0B4J2E2 113 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 CETPP11597 493 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 RFX5P48382 616 aaPredicted RBP13.36□□□□□ -0.27
LMCD1-203ENST00000415597 KIF22Q14807 665 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
LMCD1-203ENST00000415597 CCL15Q16663 113 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 ERO1BQ86YB8 467 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 TRMT2AQ8IZ69 625 aaKnown RBP13.36□□□□□ -0.27
LMCD1-203ENST00000415597 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 TEPSINQ96N21 525 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 ZNF341Q9BYN7 854 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 AKAP2Q9Y2D5 859 aa13.36□□□□□ -0.27
LMCD1-203ENST00000415597 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-203ENST00000415597 CACNB3P54284 484 aa13.35□□□□□ -0.27
LMCD1-203ENST00000415597 CRHR2Q13324 411 aa13.35□□□□□ -0.27
LMCD1-203ENST00000415597 SNAPC2Q13487 334 aa13.35□□□□□ -0.27
LMCD1-203ENST00000415597 VGLL4Q14135 290 aa13.35□□□□□ -0.27
LMCD1-203ENST00000415597 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-203ENST00000415597 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
LMCD1-203ENST00000415597 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-203ENST00000415597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.35□□□□□ -0.27
LMCD1-203ENST00000415597 FAM151AQ8WW52 585 aa13.35□□□□□ -0.27
LMCD1-203ENST00000415597 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
LMCD1-203ENST00000415597 LRRFIP2Q9Y608 721 aaKnown RBP13.35□□□□□ -0.27
LMCD1-203ENST00000415597 AOX1Q06278 1338 aa13.35□□□□□ -0.27
LMCD1-203ENST00000415597 ECM29Q5VYK3 1845 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 SSC5DA1L4H1 1573 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 SPDYE5A6NIY4 337 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 GRIK5Q16478 980 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 GORABQ5T7V8 394 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 ATG9AQ7Z3C6 839 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 COPRSQ9NQ92 184 aa13.34□□□□□ -0.27
LMCD1-203ENST00000415597 GJA5P36382 358 aa13.33□□□□□ -0.28
LMCD1-203ENST00000415597 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms