RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TCRBV5S4A2TA0A5A2 114 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 M0R2C6 588 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 LETM1O95202 739 aaPredicted RBP13.7□□□□□ -0.22
RFFL-205ENST00000415395 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
RFFL-205ENST00000415395 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 SP8Q8IXZ3 490 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 FAM184AQ8NB25 1140 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 PPEF1O14829 653 aaPredicted RBP13.69□□□□□ -0.22
RFFL-205ENST00000415395 CHGBP05060 677 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 DEFB132Q7Z7B7 95 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 GPT2Q8TD30 523 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 ZSWIM6Q9HCJ5 1215 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 CTNNA3Q9UI47 895 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 ZDHHC9Q9Y397 364 aa13.69□□□□□ -0.22
RFFL-205ENST00000415395 COL1A1P02452 1464 aaPredicted RBP13.69□□□□□ -0.22
RFFL-205ENST00000415395 ZNF532Q9HCE3 1301 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 PKP1Q13835 747 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 ZNF804AQ7Z570 1209 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 MAP7D2Q96T17 732 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 GGA1Q9UJY5 639 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
RFFL-205ENST00000415395 GPAA1O43292 621 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 GPSM2P81274 684 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 STYK1Q6J9G0 422 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
RFFL-205ENST00000415395 TTC14Q96N46 770 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
RFFL-205ENST00000415395 LRP2BPQ9P2M1 347 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 CYP46A1Q9Y6A2 500 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 SALL1Q9NSC2 1324 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
RFFL-205ENST00000415395 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
RFFL-205ENST00000415395 KLRK1P26718 216 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 SLFNL1Q499Z3 407 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 RUFY3Q7L099 469 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 MAGEB6Q8N7X4 407 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
RFFL-205ENST00000415395 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
RFFL-205ENST00000415395 ZKSCAN5Q9Y2L8 839 aa13.67□□□□□ -0.22
RFFL-205ENST00000415395 SYCE3A1L190 88 aa13.66□□□□□ -0.22
RFFL-205ENST00000415395 WTIPA6NIX2 430 aaPredicted RBP13.66□□□□□ -0.22
RFFL-205ENST00000415395 UFL1O94874 794 aa13.66□□□□□ -0.22
RFFL-205ENST00000415395 HMGB1P09429 215 aaKnown RBP13.66□□□□□ -0.22
RFFL-205ENST00000415395 GNAT2P19087 354 aa13.66□□□□□ -0.22
RFFL-205ENST00000415395 TDRD7Q8NHU6 1098 aaKnown RBP13.66□□□□□ -0.22
RFFL-205ENST00000415395 AIDAQ96BJ3 306 aa13.66□□□□□ -0.22
RFFL-205ENST00000415395 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
RFFL-205ENST00000415395 TMEM63CQ9P1W3 806 aa13.66□□□□□ -0.22
RFFL-205ENST00000415395 NSFL1CQ9UNZ2 370 aaKnown RBP13.66□□□□□ -0.22
RFFL-205ENST00000415395 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
RFFL-205ENST00000415395 KIF13BQ9NQT8 1826 aa13.66□□□□□ -0.22
RFFL-205ENST00000415395 H0YIN7 160 aa13.65□□□□□ -0.22
RFFL-205ENST00000415395 CYP21A2P08686 494 aa13.65□□□□□ -0.22
RFFL-205ENST00000415395 ALX1Q15699 326 aa13.65□□□□□ -0.22
RFFL-205ENST00000415395 ADCK5Q3MIX3 580 aa13.65□□□□□ -0.22
RFFL-205ENST00000415395 SPTY2D1Q68D10 685 aaPredicted RBP13.65□□□□□ -0.22
RFFL-205ENST00000415395 BLOC1S2Q6QNY1 142 aa13.65□□□□□ -0.22
RFFL-205ENST00000415395 MTERF4Q7Z6M4 381 aaKnown RBP13.65□□□□□ -0.22
RFFL-205ENST00000415395 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
RFFL-205ENST00000415395 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
RFFL-205ENST00000415395 ANKRD1Q15327 319 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
RFFL-205ENST00000415395 TXNRD3Q86VQ6 643 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 C2CD5Q86YS7 1000 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
RFFL-205ENST00000415395 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
RFFL-205ENST00000415395 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
RFFL-205ENST00000415395 FOXP2O15409 715 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 PTMAP06454 111 aaKnown RBP13.64□□□□□ -0.23
RFFL-205ENST00000415395 IL1R1P14778 569 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 CNKSR1Q969H4 720 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 ABCF2Q9UG63 623 aa13.64□□□□□ -0.23
RFFL-205ENST00000415395 CHD4Q14839 1912 aa13.63□□□□□ -0.23
RFFL-205ENST00000415395 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
RFFL-205ENST00000415395 RPS6KB1P23443 525 aa13.63□□□□□ -0.23
RFFL-205ENST00000415395 ZSCAN31Q96LW9 406 aaPredicted RBP13.63□□□□□ -0.23
RFFL-205ENST00000415395 NEK1Q96PY6 1258 aa13.63□□□□□ -0.23
RFFL-205ENST00000415395 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
RFFL-205ENST00000415395 FGAP02671 866 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 CYP7A1P22680 504 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 AK2P54819 239 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 CCDC183Q5T5S1 534 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms