RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 CFAP45Q9UL16 551 aa15.87■□□□□ 0.13
SSR4P1-201ENST00000415143 GPAA1O43292 621 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 NTSR2O95665 410 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 HCLS1P14317 486 aaPredicted RBP15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 MCAMP43121 646 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 ST3GAL1Q11201 340 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 SPATA5Q8NB90 893 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 BCS1LQ9Y276 419 aa15.86■□□□□ 0.13
SSR4P1-201ENST00000415143 SYCE3A1L190 88 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 FIBPO43427 364 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 IDH1O75874 414 aaKnown RBP15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 EVCP57679 992 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 ALX1Q15699 326 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 UVSSAQ2YD98 709 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 FOXD4L6Q3SYB3 417 aaPredicted RBP15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 FOXD4L3Q6VB84 417 aaPredicted RBP15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 STOX1Q6ZVD7 989 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 AIDAQ96BJ3 306 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 PPP1R9BQ96SB3 815 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 RBM27Q9P2N5 1060 aaKnown RBP15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 ZMYM6O95789 1325 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 C4BP0C0L5 1744 aa15.85■□□□□ 0.13
SSR4P1-201ENST00000415143 FGAP02671 866 aa15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 DNM1Q05193 864 aaKnown RBP15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 SCARF1Q14162 830 aa15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 ZNF396Q96N95 335 aaPredicted RBP15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 PANK2Q9BZ23 570 aa15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 NACAP1Q9BZK3 213 aa15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 TAF6LQ9Y6J9 622 aa15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
SSR4P1-201ENST00000415143 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
SSR4P1-201ENST00000415143 KIAA1551Q9HCM1 1747 aa15.83■□□□□ 0.13
SSR4P1-201ENST00000415143 FAM177BA6PVY3 158 aa15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 APPP05067 770 aa15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 PDE6AP16499 860 aa15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 HS1BP3Q53T59 392 aa15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 SLC10A5Q5PT55 438 aa15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 TMED8Q6PL24 325 aaPredicted RBP15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 CPLX2Q6PUV4 134 aaKnown RBP15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 AMIGO3Q86WK7 504 aa15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 PUS7LQ9H0K6 701 aaKnown RBP15.83■□□□□ 0.12
SSR4P1-201ENST00000415143 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 PRC1O43663 620 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 IGSF3O75054 1194 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 GADD45BO75293 160 aaPredicted RBP15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 ZPR1O75312 459 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 CDKL5O76039 1030 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 PHKA1P46020 1223 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 APOBRQ0VD83 1088 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 SCRN1Q12765 414 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 UBE4AQ14139 1066 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 CAVIN4Q5BKX8 364 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 C9orf131Q5VYM1 1079 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 SPATA32Q96LK8 384 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 CNNM2Q9H8M5 875 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 RRAGCQ9HB90 399 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 GDPD2Q9HCC8 539 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 PIH1D3Q9NQM4 214 aaKnown RBP15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 NAP1L2Q9ULW6 460 aaPredicted RBP15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 ZNF532Q9HCE3 1301 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 KIF13BQ9NQT8 1826 aa15.82■□□□□ 0.12
SSR4P1-201ENST00000415143 CHGBP05060 677 aa15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 PDIA3P30101 505 aaKnown RBP15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 CARMIL3Q8ND23 1372 aa15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 TMEM87BQ96K49 555 aa15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 TNRC6CQ9HCJ0 1690 aaKnown RBP15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 BSDC1Q9NW68 430 aaPredicted RBP15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 NARFQ9UHQ1 456 aa15.81■□□□□ 0.12
SSR4P1-201ENST00000415143 ARAP2Q8WZ64 1704 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 PTPDC1A2A3K4 754 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 CPLX1O14810 134 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 SEMA3EO15041 775 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 CHRNDQ07001 517 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 CDC37L1Q7L3B6 337 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 MB21D2Q8IYB1 491 aaPredicted RBP15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 HELBQ8NG08 1087 aaPredicted RBP15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 NLRP3Q96P20 1036 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 MTA3Q9BTC8 594 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 KRT23Q9C075 422 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 ANKRD2Q9GZV1 360 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 RBSNQ9H1K0 784 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 LAMB2P55268 1798 aa15.8■□□□□ 0.12
SSR4P1-201ENST00000415143 MYH14Q7Z406 1995 aaKnown RBP15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 A0A0G2JLW4 131 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 SLFNL1Q499Z3 407 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 TTLL5Q6EMB2 1281 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 TPTE2Q6XPS3 522 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms