RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SPOPO43791 374 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.92
SHANK3-202ENST00000414786 SMCR8Q8TEV9 937 aaPredicted RBP20.77■□□□□ 0.92
SHANK3-202ENST00000414786 SUDS3Q9H7L9 328 aaPredicted RBP20.77■□□□□ 0.92
SHANK3-202ENST00000414786 M0QZ92 97 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 ACRBPQ8NEB7 543 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 KIF9Q9HAQ2 790 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 FAM114A2Q9NRY5 505 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 PSMA7O14818 248 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 ANKS4BQ8N8V4 417 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 SEPT10Q9P0V9 454 aa20.77■□□□□ 0.92
SHANK3-202ENST00000414786 SFMBT1Q9UHJ3 866 aa20.77■□□□□ 0.91
SHANK3-202ENST00000414786 LDHBP07195 334 aaKnown RBP20.76■□□□□ 0.91
SHANK3-202ENST00000414786 STRN3Q13033 797 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 TACC1O75410 805 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 KRT2P35908 639 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 GKAP1Q5VSY0 366 aaPredicted RBP20.76■□□□□ 0.91
SHANK3-202ENST00000414786 DDX12PQ92771 950 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 CTAGE15A4D2H0 777 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 CTAGE8P0CG41 777 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 CTAGE6Q86UF2 777 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 CTAGE4Q8IX94 777 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 BACH2Q9BYV9 841 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 MAGED2Q9UNF1 606 aaPredicted RBP20.76■□□□□ 0.91
SHANK3-202ENST00000414786 IL1RL1Q01638 556 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 SDCCAG8Q86SQ7 713 aaPredicted RBP20.76■□□□□ 0.91
SHANK3-202ENST00000414786 ZSCAN30Q86W11 494 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 RIOK1Q9BRS2 568 aaKnown RBP20.76■□□□□ 0.91
SHANK3-202ENST00000414786 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.76■□□□□ 0.91
SHANK3-202ENST00000414786 WIZO95785 1651 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 PPP2R5AQ15172 486 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 POGZQ7Z3K3 1410 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 CCNT1O60563 726 aaKnown RBP20.76■□□□□ 0.91
SHANK3-202ENST00000414786 Q3C1V9 767 aa20.76■□□□□ 0.91
SHANK3-202ENST00000414786 TXNDC9O14530 226 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 UQCRFS1P1P0C7P4 283 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 SH2D4BQ5SQS7 431 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 NCAPH2Q6IBW4 605 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 RNF217Q8TC41 542 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 WHAMMQ8TF30 809 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 TNPO1Q92973 898 aaKnown RBP20.75■□□□□ 0.91
SHANK3-202ENST00000414786 LONRF3Q496Y0 759 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 BRDTQ58F21 947 aaPredicted RBP20.75■□□□□ 0.91
SHANK3-202ENST00000414786 CTNND2Q9UQB3 1225 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
SHANK3-202ENST00000414786 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 GBP7Q8N8V2 638 aaPredicted RBP20.75■□□□□ 0.91
SHANK3-202ENST00000414786 ZNF131P52739 623 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 CCDC121Q6ZUS5 278 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 VPS18Q9P253 973 aa20.75■□□□□ 0.91
SHANK3-202ENST00000414786 ZNF569Q5MCW4 686 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 SEL1L2Q5TEA6 688 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 ESYT2A0FGR8 921 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 UFL1O94874 794 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 LMBR1LQ6UX01 489 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 DNAJC25Q9H1X3 360 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 POTEB2H3BUK9 544 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 GSDMDP57764 484 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 APOBRQ0VD83 1088 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 OATP04181 439 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 MKRN3Q13064 507 aaKnown RBP20.74■□□□□ 0.91
SHANK3-202ENST00000414786 NOC2LQ9Y3T9 749 aaKnown RBP20.74■□□□□ 0.91
SHANK3-202ENST00000414786 VWA3AA6NCI4 1184 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 NSMCE1Q8WV22 266 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 DDX19AQ9NUU7 478 aaKnown RBP20.74■□□□□ 0.91
SHANK3-202ENST00000414786 LRMPQ12912 555 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 RDH13Q8NBN7 331 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 CCDC42Q96M95 316 aa20.74■□□□□ 0.91
SHANK3-202ENST00000414786 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
SHANK3-202ENST00000414786 DTNBO60941 627 aa20.73■□□□□ 0.91
SHANK3-202ENST00000414786 TOM1O60784 492 aa20.73■□□□□ 0.91
SHANK3-202ENST00000414786 LRRC59Q96AG4 307 aaKnown RBP20.73■□□□□ 0.91
SHANK3-202ENST00000414786 CLUL1Q15846 466 aa20.73■□□□□ 0.91
SHANK3-202ENST00000414786 CTAGE9A4FU28 777 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 MYO1AQ9UBC5 1043 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 TCIRG1Q13488 830 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 SYT1P21579 422 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 PTPROQ16827 1216 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 METTL14Q9HCE5 456 aaKnown RBP20.72■□□□□ 0.91
SHANK3-202ENST00000414786 CIB2O75838 187 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 PSMB7Q99436 277 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 TEX13AQ9BXU3 409 aaPredicted RBP20.72■□□□□ 0.91
SHANK3-202ENST00000414786 TRAF5O00463 557 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 IGSF3O75054 1194 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
SHANK3-202ENST00000414786 NSMFQ6X4W1 530 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 APOL6Q9BWW8 343 aa20.72■□□□□ 0.91
SHANK3-202ENST00000414786 PRPF6O94906 941 aaKnown RBP20.71■□□□□ 0.91
SHANK3-202ENST00000414786 CD19P15391 556 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 CASP2P42575 452 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 PPP1R12CQ9BZL4 782 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 PRPHP41219 470 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 STMN2Q93045 179 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 ST7Q9NRC1 585 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.71■□□□□ 0.914e-6■■■■□ 20.4
SHANK3-202ENST00000414786 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 RYBPQ8N488 228 aaPredicted RBP20.71■□□□□ 0.91
SHANK3-202ENST00000414786 POMGNT1Q8WZA1 660 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms