RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NFE2L2Q16236 605 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 COL23A1Q86Y22 540 aaPredicted RBP6.41□□□□□ -1.38
VPS41-205ENST00000414632 DNAJC10Q8IXB1 793 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 TNS4Q8IZW8 715 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 SCG3Q8WXD2 468 aaKnown RBP6.41□□□□□ -1.38
VPS41-205ENST00000414632 RTF1Q92541 710 aaKnown RBP6.41□□□□□ -1.38
VPS41-205ENST00000414632 OSBPL3Q9H4L5 887 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 IGSF5Q9NSI5 407 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 MIS18AQ9NYP9 233 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 ADAMTS8Q9UP79 889 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 BTBD11A6QL63 1104 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 BACH1O14867 736 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 SCNN1DP51172 638 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 PLA2G2CQ5R387 149 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 ZSCAN29Q8IWY8 852 aaPredicted RBP6.4□□□□□ -1.38
VPS41-205ENST00000414632 TTC5Q8N0Z6 440 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 ANKLE1Q8NAG6 615 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 COL26A1Q96A83 441 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 ASB16Q96NS5 453 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 SPON1Q9HCB6 807 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 MRS2Q9HD23 443 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 CYLDQ9NQC7 956 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 TMPRSS4Q9NRS4 437 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 PPP1R1BQ9UD71 204 aaPredicted RBP6.4□□□□□ -1.38
VPS41-205ENST00000414632 DCTN4Q9UJW0 460 aa6.4□□□□□ -1.38
VPS41-205ENST00000414632 CEMIPQ8WUJ3 1361 aa6.4□□□□□ -1.39
VPS41-205ENST00000414632 PRAMEF22A3QJZ6 481 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 GRM5P41594 1212 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 CRKLP46109 303 aaKnown RBP6.39□□□□□ -1.39
VPS41-205ENST00000414632 PIP4K2AP48426 406 aaPredicted RBP6.39□□□□□ -1.39
VPS41-205ENST00000414632 RIPK4P57078 832 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 KCNC4Q03721 635 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 EHBP1Q8NDI1 1231 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 HELQQ8TDG4 1101 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
VPS41-205ENST00000414632 CDK15Q96Q40 435 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 MTFR1LQ9H019 292 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 SERTAD1Q9UHV2 236 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 SCN7AQ01118 1682 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 BCORQ6W2J9 1755 aa6.39□□□□□ -1.39
VPS41-205ENST00000414632 N4BP2Q86UW6 1770 aaPredicted RBP6.39□□□□□ -1.39
VPS41-205ENST00000414632 AFDNP55196 1824 aaKnown RBP6.39□□□□□ -1.39
VPS41-205ENST00000414632 INHAP05111 366 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 GGCXP38435 758 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 TMPOP42166 694 aaKnown RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 TAGLNQ01995 201 aaKnown RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 DHX9Q08211 1270 aaKnown RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 RC3H1Q5TC82 1133 aaKnown RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 ZNF790Q6PG37 636 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 FBXO33Q7Z6M2 555 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 VTI1AQ96AJ9 217 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 RUNDC1Q96C34 613 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 TSPAN10Q9H1Z9 355 aaPredicted RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 PNNQ9H307 717 aaKnown RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 SRP68Q9UHB9 627 aaKnown RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 ZBTB1Q9Y2K1 713 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 RTCBQ9Y3I0 505 aaKnown RBP6.38□□□□□ -1.39
VPS41-205ENST00000414632 HEG1Q9ULI3 1381 aa6.38□□□□□ -1.39
VPS41-205ENST00000414632 CACNA1SQ13698 1873 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 CNTNAP4Q9C0A0 1308 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 APAF1O14727 1248 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 FAM13AO94988 1023 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 CD2BP2O95400 341 aaKnown RBP6.37□□□□□ -1.39
VPS41-205ENST00000414632 CYP19A1P11511 503 aaPredicted RBP6.37□□□□□ -1.39
VPS41-205ENST00000414632 NPR3P17342 541 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 FSHRP23945 695 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 CANXP27824 592 aaKnown RBP6.37□□□□□ -1.39
VPS41-205ENST00000414632 RPIAP49247 311 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 EPHA4P54764 986 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 TAF7Q15545 349 aaPredicted RBP6.37□□□□□ -1.39
VPS41-205ENST00000414632 INTS5Q6P9B9 1019 aaKnown RBP6.37□□□□□ -1.39
VPS41-205ENST00000414632 FMNL2Q96PY5 1086 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 ETNK1Q9HBU6 452 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 CCDC87Q9NVE4 849 aa6.37□□□□□ -1.39
VPS41-205ENST00000414632 LAS1LQ9Y4W2 734 aaKnown RBP6.37□□□□□ -1.39
VPS41-205ENST00000414632 KIAA1551Q9HCM1 1747 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 COL15A1P39059 1388 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 HTATSF1O43719 755 aaKnown RBP6.36□□□□□ -1.39
VPS41-205ENST00000414632 PPP1R12BO60237 982 aaPredicted RBP6.36□□□□□ -1.39
VPS41-205ENST00000414632 LILRA1O75019 489 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 RPS6KA4O75676 772 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 A1BGP04217 495 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 POLD1P28340 1107 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 TRAPPC3LQ5T215 181 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 FAM9BQ8IZU0 186 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 ZNF784Q8NCA9 323 aaPredicted RBP6.36□□□□□ -1.39
VPS41-205ENST00000414632 FLAD1Q8NFF5 587 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 FHDC1Q9C0D6 1143 aaPredicted RBP6.36□□□□□ -1.39
VPS41-205ENST00000414632 SAP130Q9H0E3 1048 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.36□□□□□ -1.392e-6■■■■■ 104.2
VPS41-205ENST00000414632 NUP98P52948 1817 aa6.36□□□□□ -1.39
VPS41-205ENST00000414632 GOLGB1Q14789 3259 aaKnown RBP6.36□□□□□ -1.39
VPS41-205ENST00000414632 SOS1Q07889 1333 aaPredicted RBP6.35□□□□□ -1.39
VPS41-205ENST00000414632 KIF13BQ9NQT8 1826 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 A0A1W2PRU2 124 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 GNRH1P01148 92 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 RFC4P35249 363 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 ADD1P35611 737 aaKnown RBP6.35□□□□□ -1.39
VPS41-205ENST00000414632 COL19A1Q14993 1142 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms