RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 PLXNC1O60486 1568 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 CCDC50Q8IVM0 306 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 C10orf67Q8IYJ2 551 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 IVNS1ABPQ9Y6Y0 642 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 YTHDC2Q9H6S0 1430 aaKnown RBP11.97□□□□□ -0.49
SCN5A-204ENST00000414099 SRGAP1Q7Z6B7 1085 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 NCAPGQ9BPX3 1015 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 LPXNO60711 386 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 HAND2P61296 217 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 ATP11AP98196 1134 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 SH2D4BQ5SQS7 431 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 STMN2Q93045 179 aa11.97□□□□□ -0.49
SCN5A-204ENST00000414099 ATL3Q6DD88 541 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 CNBD1Q8NA66 436 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 TRIM75PA6NK02 468 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 CRCPO75575 148 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
SCN5A-204ENST00000414099 FYB2Q5VWT5 728 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 NEK11Q8NG66 645 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 F8W031 263 aaPredicted RBP11.96□□□□□ -0.49
SCN5A-204ENST00000414099 STK10O94804 968 aaKnown RBP11.96□□□□□ -0.49
SCN5A-204ENST00000414099 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 SEL1L2Q5TEA6 688 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 NBPF11Q86T75 865 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 CACNA2D3Q8IZS8 1091 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 CCDC26Q8TAB7 109 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 GBP1P32455 592 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 SLC9C2Q5TAH2 1124 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 DTHD1Q6ZMT9 781 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 VCX3BQ9H321 246 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 MCM9Q9NXL9 1143 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 ARHGEF10O15013 1369 aa11.96□□□□□ -0.49
SCN5A-204ENST00000414099 TRPC3Q13507 836 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 COPS6Q7L5N1 327 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 CCDC65Q8IXS2 484 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 SNRKQ9NRH2 765 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 EBAG9O00559 213 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 ZBTB24O43167 697 aaPredicted RBP11.96□□□□□ -0.5
SCN5A-204ENST00000414099 PARP1P09874 1014 aaKnown RBP11.96□□□□□ -0.5
SCN5A-204ENST00000414099 VPS52Q8N1B4 723 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 VCXQ9H320 206 aa11.96□□□□□ -0.5
SCN5A-204ENST00000414099 MAST1Q9Y2H9 1570 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 RFX1P22670 979 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 ASIC1P78348 528 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 DNAJC21Q5F1R6 531 aaKnown RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 GPATCH8Q9UKJ3 1502 aaKnown RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 B4GALNT4Q76KP1 1039 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 EEF2P13639 858 aaKnown RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 KLHL40Q2TBA0 621 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 H0YIN7 160 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 SELENOSQ9BQE4 189 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 BACH1O14867 736 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 WDR44Q5JSH3 913 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 SPC25Q9HBM1 224 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 UGGT2Q9NYU1 1516 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 CASQ2O14958 399 aaPredicted RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 ZSCAN22P10073 491 aaPredicted RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 SARNPP82979 210 aaKnown RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 TRIM14Q14142 442 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 TBC1D9Q6ZT07 1266 aa11.95□□□□□ -0.5
SCN5A-204ENST00000414099 TRMT1LQ7Z2T5 733 aaKnown RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 IPO4Q8TEX9 1081 aaKnown RBP11.95□□□□□ -0.5
SCN5A-204ENST00000414099 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 SEC62Q99442 399 aaKnown RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 MMRN2Q9H8L6 949 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 SH3BGRP55822 239 aaPredicted RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 PPP1R7Q15435 360 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 BRAPQ7Z569 592 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 ATRIPQ8WXE1 791 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 NPATQ14207 1427 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 CEP120Q8N960 986 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 LINS1Q8NG48 757 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 EXOC7Q9UPT5 735 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 M0QZ92 97 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 ALDH1B1P30837 517 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 TCIRG1Q13488 830 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 ARHGEF6Q15052 776 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 MAGEB6Q8N7X4 407 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 NOC2LQ9Y3T9 749 aaKnown RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 TTC31Q49AM3 519 aaPredicted RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 INTS8Q75QN2 995 aaKnown RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 ARHGAP24Q8N264 748 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 MRPS27Q92552 414 aaKnown RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 NKIRAS1Q9NYS0 192 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 TAOK1Q7L7X3 1001 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 LZTS2Q9BRK4 669 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 BCAP29Q9UHQ4 241 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 SERPINA10Q9UK55 444 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 ATP6V0A2Q9Y487 856 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 STX10O60499 249 aa11.94□□□□□ -0.5
SCN5A-204ENST00000414099 GIGYF1O75420 1035 aaPredicted RBP11.94□□□□□ -0.5
SCN5A-204ENST00000414099 CALCOCO2Q13137 446 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms