RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 BCAR3O75815 825 aa20.87■□□□□ 0.93
SF1-207ENST00000413951 IFIT1P09914 478 aaKnown RBP20.87■□□□□ 0.93
SF1-207ENST00000413951 NBPF12Q5TAG4 269 aaPredicted RBP20.87■□□□□ 0.93
SF1-207ENST00000413951 FBXO46Q6PJ61 603 aaPredicted RBP20.87■□□□□ 0.93
SF1-207ENST00000413951 IFNL1Q8IU54 200 aa20.87■□□□□ 0.93
SF1-207ENST00000413951 DZIP1LQ8IYY4 767 aaKnown RBP20.87■□□□□ 0.93
SF1-207ENST00000413951 HOOK2Q96ED9 719 aa20.87■□□□□ 0.93
SF1-207ENST00000413951 MRIQ9BWK5 157 aa20.87■□□□□ 0.93
SF1-207ENST00000413951 HPS5Q9UPZ3 1129 aa20.87■□□□□ 0.93
SF1-207ENST00000413951 ECM29Q5VYK3 1845 aa20.86■□□□□ 0.93
SF1-207ENST00000413951 CRKP46108 304 aa20.86■□□□□ 0.93
SF1-207ENST00000413951 ARHGAP45Q92619 1136 aa20.86■□□□□ 0.93
SF1-207ENST00000413951 TMOD2Q9NZR1 351 aa20.86■□□□□ 0.93
SF1-207ENST00000413951 PCDHAC2Q9Y5I4 1007 aa20.86■□□□□ 0.93
SF1-207ENST00000413951 USP2O75604 605 aaPredicted RBP20.85■□□□□ 0.93
SF1-207ENST00000413951 PUM3Q15397 648 aaKnown RBP20.85■□□□□ 0.93
SF1-207ENST00000413951 ANKRD44Q8N8A2 993 aa20.85■□□□□ 0.93
SF1-207ENST00000413951 TEKT1Q969V4 418 aa20.85■□□□□ 0.93
SF1-207ENST00000413951 TDRD3Q9H7E2 651 aaKnown RBP20.85■□□□□ 0.93
SF1-207ENST00000413951 NOB1Q9ULX3 412 aaKnown RBP20.85■□□□□ 0.93
SF1-207ENST00000413951 LRRC24Q50LG9 513 aa20.84■□□□□ 0.93
SF1-207ENST00000413951 USP44Q9H0E7 712 aa20.84■□□□□ 0.93
SF1-207ENST00000413951 FBXO3Q9UK99 471 aa20.84■□□□□ 0.93
SF1-207ENST00000413951 RCAN3Q9UKA8 241 aa20.84■□□□□ 0.93
SF1-207ENST00000413951 SOX10P56693 466 aa20.83■□□□□ 0.93
SF1-207ENST00000413951 CHAF1AQ13111 956 aaPredicted RBP20.83■□□□□ 0.93
SF1-207ENST00000413951 VGLL2Q8N8G2 317 aa20.83■□□□□ 0.93
SF1-207ENST00000413951 CLMNQ96JQ2 1002 aa20.83■□□□□ 0.93
SF1-207ENST00000413951 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.83■□□□□ 0.93
SF1-207ENST00000413951 FZD1Q9UP38 647 aa20.83■□□□□ 0.93
SF1-207ENST00000413951 SSC5DA1L4H1 1573 aa20.83■□□□□ 0.92
SF1-207ENST00000413951 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
SF1-207ENST00000413951 SLC5A1P13866 664 aa20.82■□□□□ 0.92
SF1-207ENST00000413951 ERO1AQ96HE7 468 aa20.82■□□□□ 0.92
SF1-207ENST00000413951 API5Q9BZZ5 524 aaKnown RBP20.82■□□□□ 0.92
SF1-207ENST00000413951 CSADQ9Y600 493 aa20.82■□□□□ 0.92
SF1-207ENST00000413951 TCP10L2B9ZVM9 353 aa20.81■□□□□ 0.92
SF1-207ENST00000413951 EYA2O00167 538 aa20.81■□□□□ 0.92
SF1-207ENST00000413951 ARHGEF6Q15052 776 aa20.81■□□□□ 0.92
SF1-207ENST00000413951 FKBP1CQ5VVH2 108 aa20.81■□□□□ 0.92
SF1-207ENST00000413951 WDR66Q8TBY9 1149 aa20.81■□□□□ 0.92
SF1-207ENST00000413951 LPIN2Q92539 896 aa20.81■□□□□ 0.92
SF1-207ENST00000413951 ZDHHC15Q96MV8 337 aa20.81■□□□□ 0.92
SF1-207ENST00000413951 TESPA1A2RU30 521 aaPredicted RBP20.8■□□□□ 0.92
SF1-207ENST00000413951 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
SF1-207ENST00000413951 MAP3K9P80192 1104 aa20.8■□□□□ 0.92
SF1-207ENST00000413951 FAM83AQ86UY5 434 aa20.8■□□□□ 0.92
SF1-207ENST00000413951 TEPSINQ96N21 525 aa20.8■□□□□ 0.92
SF1-207ENST00000413951 IQSEC3Q9UPP2 1182 aaPredicted RBP20.8■□□□□ 0.92
SF1-207ENST00000413951 UBTFL1P0CB47 393 aaPredicted RBP20.79■□□□□ 0.92
SF1-207ENST00000413951 TRIM27P14373 513 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 FGFR2P21802 821 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 BCAMP50895 628 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 GTF2A2P52657 109 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 INTS3Q68E01 1043 aaKnown RBP20.79■□□□□ 0.92
SF1-207ENST00000413951 HHIPL2Q6UWX4 724 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 ATF7IPQ6VMQ6 1270 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 OPTNQ96CV9 577 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 ELP3Q9H9T3 547 aa20.79■□□□□ 0.92
SF1-207ENST00000413951 GNL3LQ9NVN8 582 aaKnown RBP20.79■□□□□ 0.92
SF1-207ENST00000413951 AOX1Q06278 1338 aa20.78■□□□□ 0.92
SF1-207ENST00000413951 IGF2BP3O00425 579 aaKnown RBP eCLIP20.78■□□□□ 0.92
SF1-207ENST00000413951 ZKSCAN2Q63HK3 967 aa20.78■□□□□ 0.92
SF1-207ENST00000413951 KLHDC4Q8TBB5 520 aa20.78■□□□□ 0.92
SF1-207ENST00000413951 TMEM39BQ9GZU3 492 aa20.78■□□□□ 0.92
SF1-207ENST00000413951 ARAP2Q8WZ64 1704 aa20.78■□□□□ 0.92
SF1-207ENST00000413951 CIAO1O76071 339 aa20.77■□□□□ 0.92
SF1-207ENST00000413951 DCAF15Q66K64 600 aa20.77■□□□□ 0.92
SF1-207ENST00000413951 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.77■□□□□ 0.92
SF1-207ENST00000413951 R3HDMLQ9H3Y0 253 aa20.77■□□□□ 0.92
SF1-207ENST00000413951 TRIM17Q9Y577 477 aa20.77■□□□□ 0.92
SF1-207ENST00000413951 FRAT1Q92837 279 aaPredicted RBP20.76■□□□□ 0.91
SF1-207ENST00000413951 CEP126Q9P2H0 1117 aa20.76■□□□□ 0.91
SF1-207ENST00000413951 RFX5P48382 616 aaPredicted RBP20.75■□□□□ 0.91
SF1-207ENST00000413951 SP3Q02447 781 aa20.75■□□□□ 0.91
SF1-207ENST00000413951 CRHR2Q13324 411 aa20.75■□□□□ 0.91
SF1-207ENST00000413951 VGLL4Q14135 290 aa20.75■□□□□ 0.91
SF1-207ENST00000413951 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.75■□□□□ 0.91
SF1-207ENST00000413951 ZFYVE28Q9HCC9 887 aa20.75■□□□□ 0.91
SF1-207ENST00000413951 SEMA3EO15041 775 aa20.74■□□□□ 0.91
SF1-207ENST00000413951 GJA5P36382 358 aa20.74■□□□□ 0.91
SF1-207ENST00000413951 IL15P40933 162 aaPredicted RBP20.74■□□□□ 0.91
SF1-207ENST00000413951 APOBEC3HQ6NTF7 200 aaKnown RBP20.74■□□□□ 0.91
SF1-207ENST00000413951 OTOP1Q7RTM1 612 aa20.74■□□□□ 0.91
SF1-207ENST00000413951 ZCCHC17Q9NP64 241 aaKnown RBP20.74■□□□□ 0.91
SF1-207ENST00000413951 TNNQ9UQP3 1299 aa20.74■□□□□ 0.91
SF1-207ENST00000413951 RPAP1Q9BWH6 1393 aaPredicted RBP20.73■□□□□ 0.91
SF1-207ENST00000413951 LAMB1P07942 1786 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 CCL15-CCL14A0A0B4J2E2 113 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 SPDYE5A6NIY4 337 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 GRIK5Q16478 980 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 CCL15Q16663 113 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 ERO1BQ86YB8 467 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 ZGPATQ8N5A5 531 aaKnown RBP20.73■□□□□ 0.91
SF1-207ENST00000413951 MS4A4AQ96JQ5 239 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 EFCC1Q9HA90 598 aa20.73■□□□□ 0.91
SF1-207ENST00000413951 ZBTB22O15209 634 aa20.72■□□□□ 0.91
SF1-207ENST00000413951 SLC34A2O95436 690 aa20.72■□□□□ 0.91
SF1-207ENST00000413951 CETPP11597 493 aa20.72■□□□□ 0.91
SF1-207ENST00000413951 ATP2B3Q16720 1220 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms