RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
HMGB1P11-201ENST00000413899 GPN3Q9UHW5 284 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P11-201ENST00000413899 CYP11A1P05108 521 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 SELPP16109 830 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 GSTM4Q03013 218 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 TPTE2Q6XPS3 522 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 TMEM130Q8N3G9 435 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 DCAF5Q96JK2 942 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 NACC1Q96RE7 527 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 MRPL18Q9H0U6 180 aaKnown RBP6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 KCNK4Q9NYG8 393 aa6.47□□□□□ -1.37
HMGB1P11-201ENST00000413899 C9orf172C9J069 976 aa6.46□□□□□ -1.38
HMGB1P11-201ENST00000413899 APBA3O96018 575 aa6.46□□□□□ -1.38
HMGB1P11-201ENST00000413899 NME2P22392 152 aa6.46□□□□□ -1.38
HMGB1P11-201ENST00000413899 RBM25P49756 843 aaKnown RBP6.46□□□□□ -1.38
HMGB1P11-201ENST00000413899 METTL5Q9NRN9 209 aaKnown RBP6.46□□□□□ -1.38
HMGB1P11-201ENST00000413899 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 KRBA1A5PL33 1030 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 DDX3YO15523 660 aaKnown RBP6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 FBXO24O75426 580 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 CELA3AP09093 270 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 RLBP1P12271 317 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 ZNF157P51786 506 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 NLRP12P59046 1061 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 RASSF7Q02833 373 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 CCDC85BQ15834 202 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 GRIK4Q16099 956 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 EMILIN2Q9BXX0 1053 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 SAMM50Q9Y512 469 aa6.45□□□□□ -1.38
HMGB1P11-201ENST00000413899 MEGF11A6BM72 1044 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 SCAMP3O14828 347 aaKnown RBP6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 PAGE1O75459 146 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 WISP1O95388 367 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 GSTP1P09211 210 aaKnown RBP6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 BMP6P22004 513 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 ARNTP27540 789 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 RPS26P62854 115 aaKnown RBP6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 NRG1Q02297 640 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 POU4F3Q15319 338 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 TSNAXIP1Q2TAA8 658 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 HP1BP3Q5SSJ5 553 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 SHISA2Q6UWI4 295 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 PDZD3Q86UT5 571 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 TMEM87AQ8NBN3 555 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 KRT82Q9NSB4 513 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 CACNA2D2Q9NY47 1150 aa6.44□□□□□ -1.38
HMGB1P11-201ENST00000413899 E9PSI1 815 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 F8W735 103 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 MAOBP27338 520 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 FANCCQ00597 558 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 ZNF252P-AS1Q0IIN9 211 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 ADGRE1Q14246 886 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 DUOXA2Q1HG44 320 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 Q6ZS46 218 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 KIAA1211Q6ZU35 1233 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 ERMP1Q7Z2K6 904 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 STK35Q8TDR2 534 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 UBASH3BQ8TF42 649 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 CORO1BQ9BR76 489 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 RSRP1Q9BUV0 290 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 CYP8B1Q9UNU6 501 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 SYNGAP1Q96PV0 1343 aa6.43□□□□□ -1.38
HMGB1P11-201ENST00000413899 DLGAP3O95886 979 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 ZNF76P36508 570 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 LIG3P49916 1009 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 MBTPS1Q14703 1052 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 PCNX4Q63HM2 1172 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 AGMOQ6ZNB7 445 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 ACAD11Q709F0 780 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 USP26Q9BXU7 913 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 TMPRSS13Q9BYE2 586 aa6.42□□□□□ -1.38
HMGB1P11-201ENST00000413899 GDF11O95390 407 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 CTSBP07858 339 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 PWP1Q13610 501 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 LRRC14Q15048 493 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 RASIP1Q5U651 963 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 TTBK2Q6IQ55 1244 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 CD163Q86VB7 1156 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 TMEM151AQ8N4L1 468 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 RNF208Q9H0X6 261 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 AKTIPQ9H8T0 292 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 SUGCTQ9HAC7 445 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 IGSF5Q9NSI5 407 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 USP21Q9UK80 565 aa6.41□□□□□ -1.38
HMGB1P11-201ENST00000413899 C1QTNF9BB2RNN3 333 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 TRIM37O94972 964 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 ECEL1O95672 775 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 CHRNA4P43681 627 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 HNRNPUQ00839 825 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 LLGL2Q6P1M3 1020 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 HS2ST1Q7LGA3 356 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 TXNRD3Q86VQ6 643 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 METTL16Q86W50 562 aaKnown RBP6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 SMG8Q8ND04 991 aaKnown RBP6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 WFDC12Q8WWY7 111 aa6.4□□□□□ -1.38
HMGB1P11-201ENST00000413899 RUSC1Q9BVN2 902 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms