RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TTC5Q8N0Z6 440 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 RAPGEF4Q8WZA2 1011 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 IRX2Q9BZI1 471 aaPredicted RBP16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 FOXP4Q8IVH2 680 aaPredicted RBP16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 GRAMD1CQ8IYS0 662 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 FBXO18Q8NFZ0 1043 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 DESI2Q9BSY9 194 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 TMEM51Q9NW97 253 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 ADKP55263 362 aaKnown RBP16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 ST5P78524 1137 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 TRIM65Q6PJ69 517 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 CCDC82Q8N4S0 544 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 WDR24Q96S15 920 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 AGXT2Q9BYV1 514 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 L2HGDHQ9H9P8 463 aa16.89■□□□□ 0.29
SEMA3F-202ENST00000413852 NBPF26B4DH59 902 aa16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 CSB-PGBD3P0DP91 1061 aa16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 NBPF10Q6P3W6 841 aaKnown RBP16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 SYNE4Q8N205 404 aa16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 NBPF15Q8N660 670 aa16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 GRIN1Q05586 938 aa16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 GNL2Q13823 731 aaKnown RBP16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 SHC4Q6S5L8 630 aa16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 ZNF274Q96GC6 653 aaPredicted RBP16.88■□□□□ 0.29
SEMA3F-202ENST00000413852 COBLO75128 1261 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 SASH3O75995 380 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 PHKG2P15735 406 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 ATP2B1P20020 1258 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 UBXN4Q92575 508 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 INTS13Q9NVM9 706 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 GTF2E1P29083 439 aaPredicted RBP16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 ZAP70P43403 619 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 SYKP43405 635 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 ETF1P62495 437 aaKnown RBP16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 LONRF3Q496Y0 759 aa16.87■□□□□ 0.29
SEMA3F-202ENST00000413852 SLIT1O75093 1534 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 CYP27B1O15528 508 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 BMP6P22004 513 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 MTF1Q14872 753 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 TOGARAM2Q6ZUX3 1019 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 REXO1L1PQ8IX06 675 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 CMTR1Q8N1G2 835 aaKnown RBP16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 MNS1Q8NEH6 495 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 C5P01031 1676 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 TEX35Q5T0J7 233 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
SEMA3F-202ENST00000413852 HNRNPH2P55795 449 aaKnown RBP16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 A0A1W2PQ27 194 aa16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 A0A1W2PQ64 194 aa16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 A0A1W2PQD8 194 aa16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 BMS1Q14692 1282 aaKnown RBP16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 EVCP57679 992 aa16.85■□□□□ 0.29
SEMA3F-202ENST00000413852 ALG1Q9BT22 464 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 PARP3Q9Y6F1 533 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 VWA3AA6NCI4 1184 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 APPP05067 770 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 GNG11P61952 73 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 METTL16Q86W50 562 aaKnown RBP16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 VPS37DQ86XT2 251 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 POLR3EQ9NVU0 708 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 MRC1P22897 1456 aa16.84■□□□□ 0.29
SEMA3F-202ENST00000413852 PRR29P0C7W0 189 aa16.83■□□□□ 0.29
SEMA3F-202ENST00000413852 MB21D2Q8IYB1 491 aaPredicted RBP16.83■□□□□ 0.29
SEMA3F-202ENST00000413852 NBPF3Q9H094 633 aa16.83■□□□□ 0.29
SEMA3F-202ENST00000413852 PCDHA5Q9Y5H7 936 aa16.83■□□□□ 0.29
SEMA3F-202ENST00000413852 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 CASP1P29466 404 aa16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 TTC39AQ5SRH9 613 aa16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 CPLX3Q8WVH0 158 aa16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 IMMTQ16891 758 aaKnown RBP16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 TMCO3Q6UWJ1 677 aa16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
SEMA3F-202ENST00000413852 EYA2O00167 538 aa16.82■□□□□ 0.28
SEMA3F-202ENST00000413852 CAPN2P17655 700 aa16.82■□□□□ 0.28
SEMA3F-202ENST00000413852 KRT40Q6A162 431 aa16.82■□□□□ 0.28
SEMA3F-202ENST00000413852 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
SEMA3F-202ENST00000413852 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
SEMA3F-202ENST00000413852 XAGE2Q96GT9 111 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms