RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 RUFY3Q7L099 469 aa9.85□□□□□ -0.83
HDAC9-207ENST00000413509 ADGRA1Q86SQ6 560 aa9.85□□□□□ -0.83
HDAC9-207ENST00000413509 MPNDQ8N594 471 aa9.85□□□□□ -0.83
HDAC9-207ENST00000413509 JAKMIP1Q96N16 626 aaKnown RBP9.85□□□□□ -0.83
HDAC9-207ENST00000413509 GPR101Q96P66 508 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-207ENST00000413509 RIOK1Q9BRS2 568 aaKnown RBP9.85□□□□□ -0.83
HDAC9-207ENST00000413509 UPF3BQ9BZI7 483 aaKnown RBP9.85□□□□□ -0.83
HDAC9-207ENST00000413509 COA1Q9GZY4 146 aa9.85□□□□□ -0.83
HDAC9-207ENST00000413509 MTFR1LQ9H019 292 aa9.85□□□□□ -0.83
HDAC9-207ENST00000413509 LRP2BPQ9P2M1 347 aa9.85□□□□□ -0.83
HDAC9-207ENST00000413509 PSME4Q14997 1843 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 GSG1L2A8MUP6 293 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 CYP7A1P22680 504 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 RPS6KB1P23443 525 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 MECOMQ03112 1051 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 COL9A3Q14050 684 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-207ENST00000413509 GRIPAP1Q4V328 841 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 DPP8Q6V1X1 898 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-207ENST00000413509 STOX1Q6ZVD7 989 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 FBXL16Q8N461 479 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 ZNF622Q969S3 477 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC9-207ENST00000413509 AIDAQ96BJ3 306 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 NBPF3Q9H094 633 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 EPB41L4AQ9HCS5 686 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-207ENST00000413509 CYP46A1Q9Y6A2 500 aa9.84□□□□□ -0.83
HDAC9-207ENST00000413509 SCN9AQ15858 1988 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 DDX60LQ5H9U9 1706 aaKnown RBP9.83□□□□□ -0.84
HDAC9-207ENST00000413509 A0A0G2JLW4 131 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 PATL2C9JE40 543 aaKnown RBP9.83□□□□□ -0.84
HDAC9-207ENST00000413509 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 HMGB1P09429 215 aaKnown RBP9.83□□□□□ -0.84
HDAC9-207ENST00000413509 PRDX5P30044 214 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 TTLL5Q6EMB2 1281 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 NAA16Q6N069 864 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-207ENST00000413509 GIMAP6Q6P9H5 292 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 LCORLQ8N3X6 602 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 TBC1D22AQ8WUA7 517 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 TMX3Q96JJ7 454 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 AGXT2Q9BYV1 514 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 RAI14Q9P0K7 980 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 ABCF2Q9UG63 623 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-207ENST00000413509 SUGT1Q9Y2Z0 365 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 MYH2Q9UKX2 1941 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 LAMB1P07942 1786 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 CDK5RAP2Q96SN8 1893 aa9.83□□□□□ -0.84
HDAC9-207ENST00000413509 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 FOCADQ5VW36 1801 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 MAGEB6P1A0A0J9YX57 407 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 E7EWF7 191 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-207ENST00000413509 CPA1P15085 419 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 DPEP1P16444 411 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 AK2P54819 239 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 PPP4CP60510 307 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 TGFB2P61812 414 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 EXOSC10Q01780 885 aaKnown RBP9.82□□□□□ -0.84
HDAC9-207ENST00000413509 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-207ENST00000413509 GRIK5Q16478 980 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 BLOC1S2Q6QNY1 142 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 FAM163AQ96GL9 167 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-207ENST00000413509 INTS4Q96HW7 963 aaKnown RBP9.82□□□□□ -0.84
HDAC9-207ENST00000413509 NEK1Q96PY6 1258 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 EYA3Q99504 573 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 ARMT1Q9H993 441 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 PDRG1Q9NUG6 133 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 GAKO14976 1311 aa9.82□□□□□ -0.84
HDAC9-207ENST00000413509 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 FER1L6Q2WGJ9 1857 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 ZBTB7AO95365 584 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 LDHBP07195 334 aaKnown RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 POLD1P28340 1107 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 PTGER2P43116 358 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 FKBP1AP62942 108 aaKnown RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 GSTO1P78417 241 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 TOB2Q14106 344 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 R3HDM1Q15032 1099 aaKnown RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 IMMTQ16891 758 aaKnown RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 CERS3Q8IU89 383 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 MB21D2Q8IYB1 491 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 IFNL3Q8IZI9 196 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 TTLL6Q8N841 843 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 MIGA1Q8NAN2 632 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 PSMD1Q99460 953 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 ZC3H12CQ9C0D7 883 aaKnown RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 TMX4Q9H1E5 349 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-207ENST00000413509 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 LIMCH1Q9UPQ0 1083 aa9.81□□□□□ -0.84
HDAC9-207ENST00000413509 BAZ2AQ9UIF9 1905 aaKnown RBP9.8□□□□□ -0.84
HDAC9-207ENST00000413509 PRKAB2O43741 272 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 EVCP57679 992 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 KIAA2012Q0VF49 1180 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 DHX32Q7L7V1 743 aaKnown RBP9.8□□□□□ -0.84
HDAC9-207ENST00000413509 PODNQ7Z5L7 613 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 DZIP1Q86YF9 867 aaKnown RBP9.8□□□□□ -0.84
HDAC9-207ENST00000413509 TBC1D10CQ8IV04 446 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 SUPT20HQ8NEM7 779 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms