RNA–Protein interactions for RNA: ENST00000413402.5

LINC00378-201, long intergenic non-protein coding RNA 378, humanhuman

TSL 5 BASIC

Gene LINC00378, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00378-201ENST00000413402 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
LINC00378-201ENST00000413402 PDE8BO95263 885 aa13.22□□□□□ -0.29
LINC00378-201ENST00000413402 BCAMP50895 628 aa13.22□□□□□ -0.29
LINC00378-201ENST00000413402 NOM1Q5C9Z4 860 aaKnown RBP13.22□□□□□ -0.29
LINC00378-201ENST00000413402 FBXO46Q6PJ61 603 aaPredicted RBP13.22□□□□□ -0.29
LINC00378-201ENST00000413402 FBXO33Q7Z6M2 555 aa13.22□□□□□ -0.29
LINC00378-201ENST00000413402 KLHDC4Q8TBB5 520 aa13.22□□□□□ -0.29
LINC00378-201ENST00000413402 CSADQ9Y600 493 aa13.22□□□□□ -0.29
LINC00378-201ENST00000413402 MAST3O60307 1309 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 WDHD1O75717 1129 aaPredicted RBP13.21□□□□□ -0.29
LINC00378-201ENST00000413402 SLC5A1P13866 664 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 PUM3Q15397 648 aaKnown RBP13.21□□□□□ -0.29
LINC00378-201ENST00000413402 RABL6Q3YEC7 729 aaPredicted RBP13.21□□□□□ -0.29
LINC00378-201ENST00000413402 ANKRD44Q8N8A2 993 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 OPTNQ96CV9 577 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 TMEM39BQ9GZU3 492 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
LINC00378-201ENST00000413402 AOX1Q06278 1338 aa13.2□□□□□ -0.3
LINC00378-201ENST00000413402 ZNF521Q96K83 1311 aa13.2□□□□□ -0.3
LINC00378-201ENST00000413402 UBTFL1P0CB47 393 aaPredicted RBP13.2□□□□□ -0.3
LINC00378-201ENST00000413402 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
LINC00378-201ENST00000413402 ALDH1L2Q3SY69 923 aa13.2□□□□□ -0.3
LINC00378-201ENST00000413402 HOOK2Q96ED9 719 aa13.2□□□□□ -0.3
LINC00378-201ENST00000413402 ERO1AQ96HE7 468 aa13.2□□□□□ -0.3
LINC00378-201ENST00000413402 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
LINC00378-201ENST00000413402 EYA2O00167 538 aa13.19□□□□□ -0.3
LINC00378-201ENST00000413402 CACNB3P54284 484 aa13.19□□□□□ -0.3
LINC00378-201ENST00000413402 MAP3K9P80192 1104 aa13.19□□□□□ -0.3
LINC00378-201ENST00000413402 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
LINC00378-201ENST00000413402 SIL1Q9H173 461 aa13.19□□□□□ -0.3
LINC00378-201ENST00000413402 GNL3LQ9NVN8 582 aaKnown RBP13.19□□□□□ -0.3
LINC00378-201ENST00000413402 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00378-201ENST00000413402 GTF2A2P52657 109 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 ARHGEF6Q15052 776 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 LPIN2Q92539 896 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 CDCA7LQ96GN5 454 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 SSC5DA1L4H1 1573 aa13.18□□□□□ -0.3
LINC00378-201ENST00000413402 CCL15-CCL14A0A0B4J2E2 113 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 SP3Q02447 781 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 CRHR2Q13324 411 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
LINC00378-201ENST00000413402 GRIK5Q16478 980 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 CCL15Q16663 113 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 DCAF15Q66K64 600 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
LINC00378-201ENST00000413402 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 NOB1Q9ULX3 412 aaKnown RBP13.17□□□□□ -0.3
LINC00378-201ENST00000413402 SUGT1Q9Y2Z0 365 aa13.17□□□□□ -0.3
LINC00378-201ENST00000413402 GJA5P36382 358 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 VGLL4Q14135 290 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.16□□□□□ -0.3
LINC00378-201ENST00000413402 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 VGLL2Q8N8G2 317 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 ZDHHC15Q96MV8 337 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 WRNIP1Q96S55 665 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 MRIQ9BWK5 157 aa13.16□□□□□ -0.3
LINC00378-201ENST00000413402 LDHBP07195 334 aaKnown RBP13.15□□□□□ -0.3
LINC00378-201ENST00000413402 KIF22Q14807 665 aa13.15□□□□□ -0.3
LINC00378-201ENST00000413402 ATP2B3Q16720 1220 aa13.15□□□□□ -0.3
LINC00378-201ENST00000413402 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
LINC00378-201ENST00000413402 HHIPL2Q6UWX4 724 aa13.15□□□□□ -0.3
LINC00378-201ENST00000413402 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.3
LINC00378-201ENST00000413402 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
LINC00378-201ENST00000413402 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.3
LINC00378-201ENST00000413402 KIF16BQ96L93 1317 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 CT47B1P0C2W7 299 aaPredicted RBP13.14□□□□□ -0.31
LINC00378-201ENST00000413402 CETPP11597 493 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 FGFR2P21802 821 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 TCP10Q12799 353 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 FAM83AQ86UY5 434 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 ERO1BQ86YB8 467 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00378-201ENST00000413402 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
LINC00378-201ENST00000413402 PTPN18Q99952 460 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
LINC00378-201ENST00000413402 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
LINC00378-201ENST00000413402 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
LINC00378-201ENST00000413402 CIAO1O76071 339 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 IL15P40933 162 aaPredicted RBP13.13□□□□□ -0.31
LINC00378-201ENST00000413402 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
LINC00378-201ENST00000413402 SNAPC2Q13487 334 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 FKBP1CQ5VVH2 108 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 APOBEC3HQ6NTF7 200 aaKnown RBP13.13□□□□□ -0.31
LINC00378-201ENST00000413402 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 USP40Q9NVE5 1235 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
LINC00378-201ENST00000413402 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms