RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 CDK5RAP2Q96SN8 1893 aa14.05□□□□□ -0.16
HDAC9-206ENST00000413380 FOCADQ5VW36 1801 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 ECM29Q5VYK3 1845 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 TCRBV5S4A2TA0A5A2 114 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 CDC45O75419 566 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 CHMLP26374 656 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 ADD2P35612 726 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 CHAF1AQ13111 956 aaPredicted RBP14.04□□□□□ -0.16
HDAC9-206ENST00000413380 UBE3CQ15386 1083 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 MFSD14BQ5SR56 506 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 ZSCAN25Q6NSZ9 544 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 TBC1D9Q6ZT07 1266 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 CERS5Q8N5B7 392 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 ZNF384Q8TF68 577 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 RILPL2Q969X0 211 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 GMLQ99445 158 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 FSD1Q9BTV5 496 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC9-206ENST00000413380 KCNQ5Q9NR82 932 aa14.04□□□□□ -0.16
HDAC9-206ENST00000413380 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
HDAC9-206ENST00000413380 PRDX5P30044 214 aa14.03□□□□□ -0.16
HDAC9-206ENST00000413380 MMP14P50281 582 aa14.03□□□□□ -0.16
HDAC9-206ENST00000413380 CXCL9Q07325 125 aa14.03□□□□□ -0.16
HDAC9-206ENST00000413380 ERICH6Q7L0X2 663 aa14.03□□□□□ -0.16
HDAC9-206ENST00000413380 NSUN4Q96CB9 384 aaKnown RBP14.03□□□□□ -0.16
HDAC9-206ENST00000413380 MRIQ9BWK5 157 aa14.03□□□□□ -0.16
HDAC9-206ENST00000413380 ADAMTSL1Q8N6G6 1762 aa14.03□□□□□ -0.16
HDAC9-206ENST00000413380 MAST3O60307 1309 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 RAD50Q92878 1312 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 PSMD14O00487 310 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 RNF113AO15541 343 aaKnown RBP14.02□□□□□ -0.17
HDAC9-206ENST00000413380 IDH1O75874 414 aaKnown RBP14.02□□□□□ -0.17
HDAC9-206ENST00000413380 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.17
HDAC9-206ENST00000413380 PDE6AP16499 860 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 HDLBPQ00341 1268 aaKnown RBP14.02□□□□□ -0.17
HDAC9-206ENST00000413380 GRIK5Q16478 980 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 C8orf34Q49A92 452 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 ZMYM1Q5SVZ6 1142 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 CIAPIN1Q6FI81 312 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 RSBN1LQ6PCB5 846 aaPredicted RBP14.02□□□□□ -0.17
HDAC9-206ENST00000413380 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
HDAC9-206ENST00000413380 AGBL3Q8NEM8 1001 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 FAM163AQ96GL9 167 aaPredicted RBP14.02□□□□□ -0.17
HDAC9-206ENST00000413380 LRP2BPQ9P2M1 347 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 ABCF2Q9UG63 623 aa14.02□□□□□ -0.17
HDAC9-206ENST00000413380 GAKO14976 1311 aa14.01□□□□□ -0.17
HDAC9-206ENST00000413380 RPS12P25398 132 aaKnown RBP14.01□□□□□ -0.17
HDAC9-206ENST00000413380 MECOMQ03112 1051 aa14.01□□□□□ -0.17
HDAC9-206ENST00000413380 TNIP1Q15025 636 aa14.01□□□□□ -0.17
HDAC9-206ENST00000413380 SLC9C2Q5TAH2 1124 aa14.01□□□□□ -0.17
HDAC9-206ENST00000413380 APPBP2Q92624 585 aa14.01□□□□□ -0.17
HDAC9-206ENST00000413380 JAG2Q9Y219 1238 aa14.01□□□□□ -0.17
HDAC9-206ENST00000413380 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 RAD17O75943 681 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 EIF6P56537 245 aaKnown RBP14□□□□□ -0.17
HDAC9-206ENST00000413380 C9orf131Q5VYM1 1079 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 DPF2Q92785 391 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 HELLSQ9NRZ9 838 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 DIAPH3Q9NSV4 1193 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 RAI14Q9P0K7 980 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 RNF181Q9P0P0 153 aa14□□□□□ -0.17
HDAC9-206ENST00000413380 SCN4AP35499 1836 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 DDX60LQ5H9U9 1706 aaKnown RBP13.99□□□□□ -0.17
HDAC9-206ENST00000413380 ZNF541Q9H0D2 1346 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 A0A0D9SFI3 127 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 SGSM2O43147 1006 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 GSTO1P78417 241 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 NMIQ13287 307 aaPredicted RBP13.99□□□□□ -0.17
HDAC9-206ENST00000413380 NAA16Q6N069 864 aaPredicted RBP13.99□□□□□ -0.17
HDAC9-206ENST00000413380 CASC1Q6TDU7 716 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 HHIPL2Q6UWX4 724 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 DZIP1Q86YF9 867 aaKnown RBP13.99□□□□□ -0.17
HDAC9-206ENST00000413380 CERS3Q8IU89 383 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 SLF2Q8IX21 1173 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 GPC2Q8N158 579 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 MAGEB6Q8N7X4 407 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 RUFY2Q8WXA3 655 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 OSBP2Q969R2 916 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 ESYT1Q9BSJ8 1104 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 LAMA4Q16363 1823 aa13.99□□□□□ -0.17
HDAC9-206ENST00000413380 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 MROH7-TTC4A0A0A0MT08 1334 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 EPB41L2O43491 1005 aaKnown RBP13.98□□□□□ -0.17
HDAC9-206ENST00000413380 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
HDAC9-206ENST00000413380 CHGBP05060 677 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 LDHCP07864 332 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDAC9-206ENST00000413380 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
HDAC9-206ENST00000413380 PPP4CP60510 307 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 ADGRA1Q86SQ6 560 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 MTMR14Q8NCE2 650 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 FAM227BQ96M60 508 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 MXD3Q9BW11 206 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
HDAC9-206ENST00000413380 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
HDAC9-206ENST00000413380 CYP7A1P22680 504 aa13.97□□□□□ -0.17
HDAC9-206ENST00000413380 MCMDC2Q4G0Z9 681 aa13.97□□□□□ -0.17
HDAC9-206ENST00000413380 CWC27Q6UX04 472 aaKnown RBP13.97□□□□□ -0.17
HDAC9-206ENST00000413380 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms