RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 VPS37DQ86XT2 251 aa24.12■■□□□ 1.45
CPSF7-204ENST00000413232 TEPSINQ96N21 525 aa24.12■■□□□ 1.45
CPSF7-204ENST00000413232 TCP10L2B9ZVM9 353 aa24.1■■□□□ 1.45
CPSF7-204ENST00000413232 CAVIN4Q5BKX8 364 aa24.1■■□□□ 1.45
CPSF7-204ENST00000413232 CFHR5Q9BXR6 569 aa24.1■■□□□ 1.45
CPSF7-204ENST00000413232 NOB1Q9ULX3 412 aaKnown RBP24.1■■□□□ 1.45
CPSF7-204ENST00000413232 EYA2O00167 538 aa24.09■■□□□ 1.45
CPSF7-204ENST00000413232 IGF2BP3O00425 579 aaKnown RBP eCLIP24.09■■□□□ 1.45
CPSF7-204ENST00000413232 SOX10P56693 466 aa24.09■■□□□ 1.45
CPSF7-204ENST00000413232 NOM1Q5C9Z4 860 aaKnown RBP24.09■■□□□ 1.45
CPSF7-204ENST00000413232 ATG9AQ7Z3C6 839 aa24.09■■□□□ 1.45
CPSF7-204ENST00000413232 IFNL1Q8IU54 200 aa24.09■■□□□ 1.45
CPSF7-204ENST00000413232 TMEM39BQ9GZU3 492 aa24.09■■□□□ 1.45
CPSF7-204ENST00000413232 MANSC4A6NHS7 340 aaPredicted RBP24.08■■□□□ 1.45
CPSF7-204ENST00000413232 FRAT2O75474 233 aaPredicted RBP24.08■■□□□ 1.45
CPSF7-204ENST00000413232 ZBTB48P10074 688 aaPredicted RBP24.08■■□□□ 1.45
CPSF7-204ENST00000413232 CACNB3P54284 484 aa24.08■■□□□ 1.45
CPSF7-204ENST00000413232 HPS5Q9UPZ3 1129 aa24.08■■□□□ 1.45
CPSF7-204ENST00000413232 PDE4DIPQ5VU43 2346 aa24.07■■□□□ 1.44
CPSF7-204ENST00000413232 IREB2P48200 963 aaKnown RBP24.07■■□□□ 1.44
CPSF7-204ENST00000413232 TNFAIP1Q13829 316 aa24.07■■□□□ 1.44
CPSF7-204ENST00000413232 PUM3Q15397 648 aaKnown RBP24.07■■□□□ 1.44
CPSF7-204ENST00000413232 UNCXA6NJT0 531 aa24.06■■□□□ 1.44
CPSF7-204ENST00000413232 HDLBPQ00341 1268 aaKnown RBP24.06■■□□□ 1.44
CPSF7-204ENST00000413232 ANKRD13AQ8IZ07 590 aa24.06■■□□□ 1.44
CPSF7-204ENST00000413232 TBC1D22AQ8WUA7 517 aa24.06■■□□□ 1.44
CPSF7-204ENST00000413232 FKTNO75072 461 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 IFIT1P09914 478 aaKnown RBP24.05■■□□□ 1.44
CPSF7-204ENST00000413232 INHBEP58166 350 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.05■■□□□ 1.44
CPSF7-204ENST00000413232 CNKSR2Q8WXI2 1034 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 PTPN18Q99952 460 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 SIL1Q9H173 461 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 ELP3Q9H9T3 547 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 HTTP42858 3142 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 KIF16BQ96L93 1317 aa24.05■■□□□ 1.44
CPSF7-204ENST00000413232 UBTFL1P0CB47 393 aaPredicted RBP24.04■■□□□ 1.44
CPSF7-204ENST00000413232 APOBEC3HQ6NTF7 200 aaKnown RBP24.04■■□□□ 1.44
CPSF7-204ENST00000413232 TEKT1Q969V4 418 aa24.04■■□□□ 1.44
CPSF7-204ENST00000413232 PKN2Q16513 984 aaKnown RBP24.03■■□□□ 1.44
CPSF7-204ENST00000413232 LPIN2Q92539 896 aa24.03■■□□□ 1.44
CPSF7-204ENST00000413232 ZDHHC15Q96MV8 337 aa24.03■■□□□ 1.44
CPSF7-204ENST00000413232 LRRFIP2Q9Y608 721 aaKnown RBP24.03■■□□□ 1.44
CPSF7-204ENST00000413232 CENPFP49454 3210 aa24.02■■□□□ 1.44
CPSF7-204ENST00000413232 ALDH1A1P00352 501 aa24.02■■□□□ 1.44
CPSF7-204ENST00000413232 CT47B1P0C2W7 299 aaPredicted RBP24.02■■□□□ 1.44
CPSF7-204ENST00000413232 OPTNQ96CV9 577 aa24.02■■□□□ 1.44
CPSF7-204ENST00000413232 MRIQ9BWK5 157 aa24.02■■□□□ 1.44
CPSF7-204ENST00000413232 PA2G4Q9UQ80 394 aaKnown RBP24.02■■□□□ 1.44
CPSF7-204ENST00000413232 TESPA1A2RU30 521 aaPredicted RBP24.01■■□□□ 1.43
CPSF7-204ENST00000413232 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
CPSF7-204ENST00000413232 SLC5A1P13866 664 aa24.01■■□□□ 1.43
CPSF7-204ENST00000413232 RARSP54136 660 aaKnown RBP24.01■■□□□ 1.43
CPSF7-204ENST00000413232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.01■■□□□ 1.43
CPSF7-204ENST00000413232 MS4A4AQ96JQ5 239 aa24.01■■□□□ 1.43
CPSF7-204ENST00000413232 MEIS3Q99687 375 aa24.01■■□□□ 1.43
CPSF7-204ENST00000413232 AK9Q5TCS8 1911 aa24.01■■□□□ 1.43
CPSF7-204ENST00000413232 TNNI2P48788 182 aa24■■□□□ 1.43
CPSF7-204ENST00000413232 VGLL4Q14135 290 aa24■■□□□ 1.43
CPSF7-204ENST00000413232 SUGT1Q9Y2Z0 365 aa24■■□□□ 1.43
CPSF7-204ENST00000413232 CIAO1O76071 339 aa23.99■■□□□ 1.43
CPSF7-204ENST00000413232 MAP3K9P80192 1104 aa23.99■■□□□ 1.43
CPSF7-204ENST00000413232 CAP1Q01518 475 aa23.99■■□□□ 1.43
CPSF7-204ENST00000413232 CRHR2Q13324 411 aa23.99■■□□□ 1.43
CPSF7-204ENST00000413232 FBXO46Q6PJ61 603 aaPredicted RBP23.99■■□□□ 1.43
CPSF7-204ENST00000413232 API5Q9BZZ5 524 aaKnown RBP23.99■■□□□ 1.43
CPSF7-204ENST00000413232 ATP2B3Q16720 1220 aa23.98■■□□□ 1.43
CPSF7-204ENST00000413232 HHIPL2Q6UWX4 724 aa23.98■■□□□ 1.43
CPSF7-204ENST00000413232 MYH2Q9UKX2 1941 aa23.98■■□□□ 1.43
CPSF7-204ENST00000413232 WDR66Q8TBY9 1149 aa23.97■■□□□ 1.43
CPSF7-204ENST00000413232 CEP126Q9P2H0 1117 aa23.97■■□□□ 1.43
CPSF7-204ENST00000413232 FBXO3Q9UK99 471 aa23.97■■□□□ 1.43
CPSF7-204ENST00000413232 TNNQ9UQP3 1299 aa23.97■■□□□ 1.43
CPSF7-204ENST00000413232 MAST3O60307 1309 aa23.96■■□□□ 1.43
CPSF7-204ENST00000413232 PRDX5P30044 214 aa23.96■■□□□ 1.43
CPSF7-204ENST00000413232 ADORA1P30542 326 aa23.96■■□□□ 1.43
CPSF7-204ENST00000413232 PHKA1P46020 1223 aa23.96■■□□□ 1.43
CPSF7-204ENST00000413232 DIXDC1Q155Q3 683 aa23.96■■□□□ 1.43
CPSF7-204ENST00000413232 FAM83AQ86UY5 434 aa23.96■■□□□ 1.43
CPSF7-204ENST00000413232 BRI3BPQ8WY22 251 aa23.96■■□□□ 1.43
CPSF7-204ENST00000413232 FKBP1CQ5VVH2 108 aa23.95■■□□□ 1.42
CPSF7-204ENST00000413232 INTS3Q68E01 1043 aaKnown RBP23.95■■□□□ 1.42
CPSF7-204ENST00000413232 OTOP1Q7RTM1 612 aa23.95■■□□□ 1.42
CPSF7-204ENST00000413232 COPRSQ9NQ92 184 aa23.95■■□□□ 1.42
CPSF7-204ENST00000413232 DAGLAQ9Y4D2 1042 aa23.95■■□□□ 1.42
CPSF7-204ENST00000413232 TRIM17Q9Y577 477 aa23.95■■□□□ 1.42
CPSF7-204ENST00000413232 SNCAIPQ9Y6H5 919 aa23.95■■□□□ 1.42
CPSF7-204ENST00000413232 ZKSCAN4Q969J2 545 aaPredicted RBP23.94■■□□□ 1.42
CPSF7-204ENST00000413232 OTUD5Q96G74 571 aa23.94■■□□□ 1.42
CPSF7-204ENST00000413232 TMOD2Q9NZR1 351 aa23.94■■□□□ 1.42
CPSF7-204ENST00000413232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.94■■□□□ 1.42
CPSF7-204ENST00000413232 KIAA0100Q14667 2235 aaKnown RBP23.94■■□□□ 1.42
CPSF7-204ENST00000413232 IL15P40933 162 aaPredicted RBP23.93■■□□□ 1.42
CPSF7-204ENST00000413232 OTUD7BQ6GQQ9 843 aa23.93■■□□□ 1.42
CPSF7-204ENST00000413232 CDC42EP5Q6NZY7 148 aa23.93■■□□□ 1.42
CPSF7-204ENST00000413232 MIGA2Q7L4E1 593 aa23.93■■□□□ 1.42
CPSF7-204ENST00000413232 CD99L2Q8TCZ2 262 aa23.93■■□□□ 1.42
CPSF7-204ENST00000413232 ARHGAP45Q92619 1136 aa23.93■■□□□ 1.42
CPSF7-204ENST00000413232 CSADQ9Y600 493 aa23.93■■□□□ 1.42
CPSF7-204ENST00000413232 CCL15-CCL14A0A0B4J2E2 113 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms