RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
RAB11FIP3-202ENST00000412256 UTYO14607 1347 aa17.51■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CRHR2Q13324 411 aa17.51■□□□□ 0.39
RAB11FIP3-202ENST00000412256 GRIK5Q16478 980 aa17.51■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
RAB11FIP3-202ENST00000412256 OPTNQ96CV9 577 aa17.51■□□□□ 0.39
RAB11FIP3-202ENST00000412256 PDE8BO95263 885 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 BCAMP50895 628 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 RABL6Q3YEC7 729 aaPredicted RBP17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 OTOP1Q7RTM1 612 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 TBC1D22AQ8WUA7 517 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 ERO1AQ96HE7 468 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 PTPN18Q99952 460 aa17.5■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CACNB3P54284 484 aa17.49■□□□□ 0.39
RAB11FIP3-202ENST00000412256 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
RAB11FIP3-202ENST00000412256 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.49■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CD99L2Q8TCZ2 262 aa17.49■□□□□ 0.39
RAB11FIP3-202ENST00000412256 TEKT1Q969V4 418 aa17.49■□□□□ 0.39
RAB11FIP3-202ENST00000412256 TEPSINQ96N21 525 aa17.49■□□□□ 0.39
RAB11FIP3-202ENST00000412256 TESPA1A2RU30 521 aaPredicted RBP17.48■□□□□ 0.39
RAB11FIP3-202ENST00000412256 PRPF38BQ5VTL8 546 aaKnown RBP17.48■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
RAB11FIP3-202ENST00000412256 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
RAB11FIP3-202ENST00000412256 USP44Q9H0E7 712 aa17.48■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CSADQ9Y600 493 aa17.48■□□□□ 0.39
RAB11FIP3-202ENST00000412256 PTPRCP08575 1304 aa17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 IFIT1P09914 478 aaKnown RBP17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 SP3Q02447 781 aa17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 VGLL4Q14135 290 aa17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 TMOD2Q9NZR1 351 aa17.47■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
RAB11FIP3-202ENST00000412256 E9PSI1 815 aa17.46■□□□□ 0.39
RAB11FIP3-202ENST00000412256 GTF2A2P52657 109 aa17.46■□□□□ 0.39
RAB11FIP3-202ENST00000412256 CCL15Q16663 113 aa17.46■□□□□ 0.39
RAB11FIP3-202ENST00000412256 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
RAB11FIP3-202ENST00000412256 OTUD5Q96G74 571 aa17.46■□□□□ 0.39
RAB11FIP3-202ENST00000412256 PTPN22Q9Y2R2 807 aa17.46■□□□□ 0.39
RAB11FIP3-202ENST00000412256 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
RAB11FIP3-202ENST00000412256 INTS3Q68E01 1043 aaKnown RBP17.45■□□□□ 0.38
RAB11FIP3-202ENST00000412256 BRI3BPQ8WY22 251 aa17.45■□□□□ 0.38
RAB11FIP3-202ENST00000412256 ZDHHC15Q96MV8 337 aa17.45■□□□□ 0.38
RAB11FIP3-202ENST00000412256 ZFYVE28Q9HCC9 887 aa17.45■□□□□ 0.38
RAB11FIP3-202ENST00000412256 A0A1B0GUL6 1792 aa17.45■□□□□ 0.38
RAB11FIP3-202ENST00000412256 TAF1CQ15572 869 aaPredicted RBP17.44■□□□□ 0.38
RAB11FIP3-202ENST00000412256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.38
RAB11FIP3-202ENST00000412256 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
RAB11FIP3-202ENST00000412256 ECM29Q5VYK3 1845 aa17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 POTEFA5A3E0 1075 aa17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 EYA2O00167 538 aa17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 WDHD1O75717 1129 aaPredicted RBP17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 SLC5A1P13866 664 aa17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 ZKSCAN4Q969J2 545 aaPredicted RBP17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 WRNIP1Q96S55 665 aa17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 SUGT1Q9Y2Z0 365 aa17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 MAST3O60307 1309 aa17.43■□□□□ 0.38
RAB11FIP3-202ENST00000412256 FGFR2P21802 821 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 ARHGEF6Q15052 776 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 FAM83AQ86UY5 434 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 FAM43AQ8N2R8 423 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 LPIN2Q92539 896 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
RAB11FIP3-202ENST00000412256 CETPP11597 493 aa17.41■□□□□ 0.38
RAB11FIP3-202ENST00000412256 CAP1Q01518 475 aa17.41■□□□□ 0.38
RAB11FIP3-202ENST00000412256 MIGA2Q7L4E1 593 aa17.41■□□□□ 0.38
RAB11FIP3-202ENST00000412256 ERO1BQ86YB8 467 aa17.41■□□□□ 0.38
RAB11FIP3-202ENST00000412256 WDR66Q8TBY9 1149 aa17.41■□□□□ 0.38
RAB11FIP3-202ENST00000412256 CDCA7LQ96GN5 454 aa17.41■□□□□ 0.38
RAB11FIP3-202ENST00000412256 SIL1Q9H173 461 aa17.41■□□□□ 0.38
RAB11FIP3-202ENST00000412256 SPDYE5A6NIY4 337 aa17.4■□□□□ 0.38
RAB11FIP3-202ENST00000412256 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
RAB11FIP3-202ENST00000412256 ALDH1L2Q3SY69 923 aa17.4■□□□□ 0.38
RAB11FIP3-202ENST00000412256 FKBP1CQ5VVH2 108 aa17.4■□□□□ 0.38
RAB11FIP3-202ENST00000412256 DCAF15Q66K64 600 aa17.4■□□□□ 0.38
RAB11FIP3-202ENST00000412256 CEP126Q9P2H0 1117 aa17.4■□□□□ 0.38
RAB11FIP3-202ENST00000412256 SNCAIPQ9Y6H5 919 aa17.4■□□□□ 0.38
RAB11FIP3-202ENST00000412256 IRF6O14896 467 aa17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 EN2P19622 333 aaPredicted RBP17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 TCP10Q12799 353 aa17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 SNAPC2Q13487 334 aa17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 TMEM106CQ9BVX2 250 aa17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 KIF16BQ96L93 1317 aa17.39■□□□□ 0.37
RAB11FIP3-202ENST00000412256 DIXDC1Q155Q3 683 aa17.38■□□□□ 0.37
RAB11FIP3-202ENST00000412256 ATG9AQ7Z3C6 839 aa17.38■□□□□ 0.37
RAB11FIP3-202ENST00000412256 NBPF11Q86T75 865 aa17.38■□□□□ 0.37
RAB11FIP3-202ENST00000412256 ARMC5Q96C12 935 aa17.38■□□□□ 0.37
RAB11FIP3-202ENST00000412256 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
RAB11FIP3-202ENST00000412256 BTBD19C9JJ37 291 aa17.37■□□□□ 0.37
RAB11FIP3-202ENST00000412256 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms